Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_0143 |
Symbol | |
ID | 4117790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 147289 |
End bp | 148863 |
Gene Length | 1575 bp |
Protein Length | 524 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638034935 |
Product | SSS family solute/sodium (Na+) symporter |
Protein accession | YP_642934 |
Protein GI | 108802997 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGACC GGGCGATAGC GACCATCTTC TTCGTCCTCA TCATAGTGCT CACCCTCGGG ATAACCGCCT GGGCCGCCCG CCGCAACAAG GACACCGCCC ACCACTACGT CGCCGGCGGC GAGATAAAGG GCTGGCAGAA CGGGCTCGCC ATCTCCGGCG ACTACCTCTC GGCGGCCAGC TTTCTCGGGA TAGCCGGTTC GATCGCGTTG ACGGGGTTCT CCGGCTTCTA CCTCTCGATC GGATTCCTGG TTGCTTATCT GGTGGTGCTG CTGCTCGTCG CCGAGCCCCT GAGGAACCTC GGCAAGTACA CCTTCGCCGA CATGCTAGCG GCCCGCTTCA ACCTGCGCAG CGTCCGTTCG GCGGCGGCGC TCTCCACCAT CGCCATAAGC ACCTTCTACA TGATCGCCCA GATGGTGGGC GCTGGGGCGC TCATAGAGCT TCTGCTCGGG CTCCCCTACG TGGCCTCGGT CGTGATCATC GGGGTGCTGA TGACCATCTA CATCGCGGCC GGGGGCATGG TGGCGACCAC CTGGATCCAG ATCGTCAAGG CGGTCCTGCT GATCTCCGGA ACCCTTGCCC TGAGCATCGC CGTGCTCGCC CAGTTCGGCT TCAACCCGGT GGCCATCTTC GACCGGGTAG AGGCAGAGCT GGGGCCGGAG ATGGTCCTCC CGCCGCCCCC GGAGGGCTTC GTCTCCGGCA TAGACGTCGT CTCGCTCAAC ATCGCGCTCG TCTTCGGCAC CGCCGGGCTG CCGCACATCC TCATGCGGTT CCTCACCGTC CCGGACGCCA AGACGGCCCG CAACTCCATC ATCGTCGCCA CCTGGATCAT AGGGCTCTTC TACCTGATGA CCCCGATCAT GGGCTACGGC GCGGCCCTGC TGGTGGGCCA GGACGTCATC GCCGAGCAGA ACCCCGCCGG CAACACCGCG GCCCCGCAGC TCGCCGGAGA GCTCGGCGGC CCCATCTTCC TGGCCTTTAT CTCGGCGGTG GCCTTCGCCA CCATCGTGGC GGTGGTGGCC GGGCTCGTGA TCGCGGCCTC CAGCGCCTTC GCCCACGACT TCTACACCAA CGTCATCCGG GGCGGCGAGG CGAGCGAGCA GGAGCAGTTC CGCGCGGCCC GCATCGCGGC CGTCGCCGTC TCCCTGGGCG CGATGTTCCT CGCCATCTTC GCCCGCGACT TCAACGTCTC GTTCTTGGTC GCCCTGGCCT TTGCGGTCGC CGCCAGCGCC AACGTTCCGA CCATCCTGTT CACGATCTTC TGGCGCAGGT TCAACACGGC GGGCGCCATC GCGGGCATCC TCACGGGGCT GTTCTCGTGC ATCGTCCTGA TCATTCTCAG CCCCAACATC CTCGACGTCT TCCCGCTGGC CAACCCGGCG ATCATCTCCA TGCCGCTGGG CTTCGCCGCC TGCTACCTGG GCACGATCCT CACCGGCGAG GCCGCGGAGC GCGAGATGGC CGAGGGCAAG CAGATCTCCT ACGACGAGAT CTACGTCCGC GCCAACACCG GCATAACCCG CGTGGAGGAG GAGCTGCGCG AGGCCGCAGC GGCCGAGGAG CCGCGGACCA CCTAG
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Protein sequence | MSDRAIATIF FVLIIVLTLG ITAWAARRNK DTAHHYVAGG EIKGWQNGLA ISGDYLSAAS FLGIAGSIAL TGFSGFYLSI GFLVAYLVVL LLVAEPLRNL GKYTFADMLA ARFNLRSVRS AAALSTIAIS TFYMIAQMVG AGALIELLLG LPYVASVVII GVLMTIYIAA GGMVATTWIQ IVKAVLLISG TLALSIAVLA QFGFNPVAIF DRVEAELGPE MVLPPPPEGF VSGIDVVSLN IALVFGTAGL PHILMRFLTV PDAKTARNSI IVATWIIGLF YLMTPIMGYG AALLVGQDVI AEQNPAGNTA APQLAGELGG PIFLAFISAV AFATIVAVVA GLVIAASSAF AHDFYTNVIR GGEASEQEQF RAARIAAVAV SLGAMFLAIF ARDFNVSFLV ALAFAVAASA NVPTILFTIF WRRFNTAGAI AGILTGLFSC IVLIILSPNI LDVFPLANPA IISMPLGFAA CYLGTILTGE AAEREMAEGK QISYDEIYVR ANTGITRVEE ELREAAAAEE PRTT
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