| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0139 |
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| Symbol | |
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| ID | 4117709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 143618 |
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| End bp | 144934 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638034931 |
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| Product | LigA |
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| Protein accession | YP_642930 |
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| Protein GI | 108802993 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGGCAG CGATGGACAA CGCGAGGCTG AAACGGCACC TGGCCGTATG GGCCGGGCTC
CTGCTCGGGA TGGCGCTCGT CGTGCTGGCG GGGGCGGGCG AGGGCGAGGC CGCCACGCAG
CTGAAGGGCT CCTTCCGGGG CAACGCCTAC GGCACCTACG CCAACGCCCA GGCCGGCCCG
GTCGCGGCGA CGCTCGGGCG CTCGGCCTTC ATACCGTGCC CGTGCAACGG GACCGGGGGC
AAGACCCTCT CCAACTCCGT CGACTCGCTC GACGCCGGAG AGGTGCTCAG GGCCGGGGCG
CTGCGCAGCA CCGTCTTCAC CAGGAAGACC TCCACCTCGG CCCAGGTCAG GAACACCTCC
ACGGTGAGCG GGCTCAACCT GCTGGACGGC CTCATCACCG CCGACGCCGT GAAGGCCGTG
GCCAACACCA CGGCGGACGC CAGGAGGATA CGGAGCTCGG CGGCGGGCTC CTCGTTCGTC
GACCTCAGGG TCGACGGCCG GCGCGTCGCC GACGTCTCGC CGAACACCAG GATAGACCTC
CCCGGCCTCG GGTACGTCAT CCTCAAGAAC GTGGTGCCCG GCGGCAACGG CAGGAGCCTC
GGCAAGGTGA CGGTGGAGAT GATCACCGTC GTCGTCACCC GGCAGAACGA ATTCGGCCTG
CCGGTGGGCG CCAGGATCGT GGTGGCCCAC GCCTACAGCG GCTTCTCCCG CAACCAGCCG
GAGGTCATCG TCGGCGGCCA GGCCTACGCC GCGACCGCCA ACGCCGCCGT CGGCGACAGC
CTCCAGAACC GCATCGGCAA GGCCGCCTTC GTGGTCATCG GGTGCGAGGG GACGGGCGGC
AAGGTCCGCA CCAACAACGT GCAGGCCCTG AGCGTGGGCG ACGTCCTCTC CATCGGCACC
GGCAGGACGA CCGCCTTCGG CGGCCGGCGC GACTCCGGCA CCGTCGCCAG GACCACCGCC
ACGGTCCAGG ATCTCAGACT GCTCGGGGGC CTCATACGCG CCGACGCCGT GAAGGCCGTG
GCCCAGGACA CCTTCAGGAA CGGCCGCAGG ACAAGCTCCA CCCAGGGCAC CGAGTTCGCC
CGGCTGCGGG TCGCGGGCCT TCCGGTGCCC GTAGACGTCA GGCCCAACAC GCGCCTGGAT
CTCCCCGGCA TCGGCTACGT GGTGGTGAAC GAGCAGAAGA TACCCGCCGC GAACTCCGAC
GCCAGGACCC AGGTCAACGG TTTGCGGGTG GTCGTCACCC GCAACAACCC GCTCGGGCTG
CCGGTGGGCG CCCAGATCGT CGTGGCCCAC GCCGACAGCC GGGTCGCCCG CTTCTAG
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| Protein sequence | MGAAMDNARL KRHLAVWAGL LLGMALVVLA GAGEGEAATQ LKGSFRGNAY GTYANAQAGP
VAATLGRSAF IPCPCNGTGG KTLSNSVDSL DAGEVLRAGA LRSTVFTRKT STSAQVRNTS
TVSGLNLLDG LITADAVKAV ANTTADARRI RSSAAGSSFV DLRVDGRRVA DVSPNTRIDL
PGLGYVILKN VVPGGNGRSL GKVTVEMITV VVTRQNEFGL PVGARIVVAH AYSGFSRNQP
EVIVGGQAYA ATANAAVGDS LQNRIGKAAF VVIGCEGTGG KVRTNNVQAL SVGDVLSIGT
GRTTAFGGRR DSGTVARTTA TVQDLRLLGG LIRADAVKAV AQDTFRNGRR TSSTQGTEFA
RLRVAGLPVP VDVRPNTRLD LPGIGYVVVN EQKIPAANSD ARTQVNGLRV VVTRNNPLGL
PVGAQIVVAH ADSRVARF
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