Gene Rxyl_0121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0121 
Symbol 
ID4117788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand- 
Start bp124829 
End bp125464 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content69% 
IMG OID638034913 
Producthypothetical protein 
Protein accessionYP_642912 
Protein GI108802975 
COG category[S] Function unknown 
COG ID[COG3544] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.261528 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGCG CAGGGACGCT CGCTACGGTC GTCGCCGCGC TCCTCCTGTC CGCCTGCGCC 
GGCGCGGGCG TGCAGGAGGA GCCGCAGGAT GGGGCCATGC ACGGCGGCGG GCAAGGAGAA 
GAACACGCGG AGCAGATGGG CGGCGGGCAC GGCGCCATGG GCGGCATGCT CGCGGCGGAC 
AACTACTCCG ACCGGCGGTT CATAGACCTG ATGGTCCCGC ACCACCAGGG GGCGGTGCAC 
ATGGCCCGGG TGGCCCTCGA GAACGCCGAG CACCGGGAGA TAAGGCGGCT GGCCCGGAAC 
ATAATCCGCA GCCAGCGGGC GGAGATAGAG GAGCTCAGGG ACATCAAACG CCAGCGGTAC 
GGGACCTCCA GCGTCCCCAT GCAGATGGAC CGCGAGCAGA CGCAGATGAT GGGCATGATG 
GACCCGCAGG AGCTCGCCGG CGAAGAGCCC TTCGACAGGG CGTTTATAGA CGCCATGATC 
CCGCACCACC GCTCGGCGAT CGAGATGGCC CGGGTGGCCC GCGAACAGAC GGAGAACCCG 
CGCATCCGGA GGCTCGCCGA GGACATCATC CGCGAGCAGC AGCGCGAGAT AGAGCAGATG 
CAGCGCTGGC GCGAGGAGTG GTATTCGGAG GGCTAG
 
Protein sequence
MKRAGTLATV VAALLLSACA GAGVQEEPQD GAMHGGGQGE EHAEQMGGGH GAMGGMLAAD 
NYSDRRFIDL MVPHHQGAVH MARVALENAE HREIRRLARN IIRSQRAEIE ELRDIKRQRY 
GTSSVPMQMD REQTQMMGMM DPQELAGEEP FDRAFIDAMI PHHRSAIEMA RVAREQTENP 
RIRRLAEDII REQQREIEQM QRWREEWYSE G