Gene Rxyl_0115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0115 
Symbol 
ID4117782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp120789 
End bp121931 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content75% 
IMG OID638034907 
ProductVWA containing CoxE-like protein 
Protein accessionYP_642906 
Protein GI108802969 
COG category[R] General function prediction only 
COG ID[COG3552] Protein containing von Willebrand factor type A (vWA) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTTGAGG AGGAACCCGC CCCCCGGATG CTGGAGGCGG CGGTCGCCTT CGGGCGCGTG 
CTGCGCGGCG CGGGGCTCGC GGTGGGCACC GACCGGCTCG TGGGCTTCGC CCGGGCGCTC
GAGGAGCTGG ACGCCGGGCG CCGGGAGGAC GTCTACTGGG CCGGGAGGAT CACGCTGACC
TCCCGCCCGG AGGACATCGA GGTCTACGAC CGGGCCTTCG AGGCCTTCTG GGAGCGGGGC
GAGGAGGCCC CCCCGCCGCC GCGAGGGGGG GCCGAGCTCC GCATCCCCGA GCCCGAGGAC
TCCGTGATGC CGGCCAAGGA GTCCGTCGAG GCTGACGAGC GGGGCGAGGA GGCGGTCGGG
CTGCGCTACA GCCCGGTAGA GGTGCTGCGC AAAAAGGACT TCGCCCTCTA CTCCCCCGAG
GAGTTCGCCG AGCTGCAGCG GATGCTCTCC GACCTGCGGC TCTCCGGGGC CCTCCGGCGC
ACCCGCCGGC TGGAGCCCGC GCGGCGGGGC CGGCACGACC CCCGCCGCAC CATGCGCGGG
GCCATGCGCA CCGGCGGGGA GACCGTCAGG CACCGCTTCC GGCGGGCCAA GGACCAGCCG
CGCAGGGTGG TGCTCCTGTG CGACGTGTCG GGCTCCATGT CTCCCTACAG CCGGGCGCTG
CTGCGCTTTC TGCACGCCGG GGTCATAAGC GGGGCGCGCC TCGAGGCCTT CTCCGTGGGG
ACCCGGCTCA CCAGGATCAC GCGGGAGCTC TCCACCCGCG ACCCCGACCG GGCCCTGCGG
CAGGCGGCCG GGGCCGTGCG GGACCTCTCG GGGGGGACCC GTCTCGGGGA CGCGCTCAAG
GAGTTCGTGG ACCGCTGGGG GCAGCGCGGG ATGGCCCGCG GGGCCGTGGT GGTCATCCTC
TCCGACGGCT GGGACCGGGG CGACGTGGCG TTGCTCGCCG AGCAGATGCG GCGCATAAGG
CGGCTGGCCT ACCGTGTGAT CTGGGTGAAC CCCCTCAAGG CCTCCCCCGG GTACCGGCCG
CTCGCCGCGG GGATGGCCGC CGCCCTGCCC TACGTGGACG TCTTTCTCTC CGGGCACAAC
TTCGAGTCCC TGGAGGAGCT GGCCCGCGCC GTCGCCGAGG CGGCGGGAGA CGGCCGGCGG
TAA
 
Protein sequence
MVEEEPAPRM LEAAVAFGRV LRGAGLAVGT DRLVGFARAL EELDAGRRED VYWAGRITLT 
SRPEDIEVYD RAFEAFWERG EEAPPPPRGG AELRIPEPED SVMPAKESVE ADERGEEAVG
LRYSPVEVLR KKDFALYSPE EFAELQRMLS DLRLSGALRR TRRLEPARRG RHDPRRTMRG
AMRTGGETVR HRFRRAKDQP RRVVLLCDVS GSMSPYSRAL LRFLHAGVIS GARLEAFSVG
TRLTRITREL STRDPDRALR QAAGAVRDLS GGTRLGDALK EFVDRWGQRG MARGAVVVIL
SDGWDRGDVA LLAEQMRRIR RLAYRVIWVN PLKASPGYRP LAAGMAAALP YVDVFLSGHN
FESLEELARA VAEAAGDGRR