| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0103 |
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| Symbol | |
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| ID | 4117770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 107722 |
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| End bp | 109641 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 638034895 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_642894 |
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| Protein GI | 108802957 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCCGA GCAGCTTGCA GGGCTACCAG CCGCTCGTCT TCTACGCGGC GGCGGCCGTC
GCGGGCGCCC TGCTGGCCGG GCTTGCGGCC CTCCTCCTGT GGCGCCGCGG GCGCCCGTCT
CGAAGGAGGG ACGCCCTGCG CGCGGCCGCC TTCGAGCAGG CGGCGGAGGG GATGCTGCTC
GTCTCGGGGG ACCGGGTGCT GGAGGCGAAC GCCGCCTGCG CCGCCCTGCT CGGCAGGGAG
CGCGGGGAGC TTGCGGGGAT GCCCCTCGGG GAGCTCCTCG CCGGCGGGGC CGGGGGTGTG
CCTCTGCCGC CCGGCAAGCG CAGCTGGTCG GGGACGCTCG CCCTGAGGTC CGGCGGGGGC
GAGCCCGTGG AGTGCGAGGC GGCGGCGAGC CGGGTGCTCG CCGGCGGCCG GGAGGCGGTG
TGCCTCGCGC TGCGGGACGT CACGGAGCGG CGGCGCGAGG AGGAGAAGCT GCGGGAGACC
GAGTCCCGCT ACCGGACGCT CGTCGAGCAG GTGCCCGCCA TCGTCTACAT CGAGGACGTG
CAGACGCAGG CCACCCTCTA CGACAGCCCG CGGATAGAGG AGATCCTGGG CTACCCGCGG
GACCTCTGCG AGCGCGAGCC CCTCTACTGG CACCGCATCC TCTACCCCGA GGACCGCGAG
CGGGTGCTGG AGGCCGAGCG GGAGGCGGTC GAGCGGGGCA GCTTTGTCCT GGAGTACCGG
GTCTTTGCCG CCGACGGCCG GGTGGTGTGG GTCCGGGACG AGGCCCGCCT CCTGCGCGAC
GAGTCGGGCG AGCCCCGCTT CTGGCAGGGT GTGATCTCGG ACATCACCGA GCAGCGGCGG
GCGGAGGACG CGCTGCGGGA GAGCGAGGAG CGCTACCGCT CGCTGGTGCA GCTCTCCCCG
GACGGGGTGG CGGTGGAGAG CGAGGGGCGC TTTGTCTACC TGAACGAGGC GGGGGCCCGC
CTGCTGGGGG CCTCCTCCCC GCAGGAGGTG CTCGGCCAGC CGGTCATGGA GCGGGTGCAC
CCGGACTGCC GGGAGAACGC CCGCCGCCGC GCCCGGCGCC TCCGGCGGGG CGAGCGCGTG
GAGCTGCAGG AGGAGCGCTG GCTCCGCCTG GACGGTCGGG AGATGGACGT GGAGGTCTCC
GCGGCGCCGG TGCAGTACGG GGGGCGGCCC TCCGCCCAGC TGGTGCTCCG GGACGTCACC
GGCAGGAAGC GCGCCGAGCG GGAGATCGTC CGCCAGAAGG CGGAGCTTGC CCGCTCCAAC
GCGGAGCTGG AGCAGTTCGC CTACCTGATC GCCCACGACC TCCGCGCCCC GCTCCGGAGC
ATGGACGGCT TCGCCCAGAT CCTGCTGGAG GACTGCGCCC CCCGGCTCGG CCCCGACGGC
CGGGAGTACC TCGCGCGCAT CCAGCGCGCC ACCCGCAAGA TGGCCCGGAT GATCGACGAG
CTTCTCGGCC TCTCCCGGCT CGCCCGCGCG GACATCCGGC GCGAGCCGGT GGACCTCTCG
GCCATGGCCC GCTCCATCGG CGAGGAGCTG CGGCAGGGGG AGCCCGACCG CCGGGTGGAG
TTCATCGTCG CGGGCGGGCT CGCCGCCGAG GGCGACCGCC GCCTGCTGCG GGTCGCCCTC
GCCAACCTCC TGGAGAACGC CTGGAAGTTC ACCCGCCGCA CCCCCCGCCC CCGCATAGTC
TTCGGCCGCA TAGAGCGCGG CGGAGAGCGC GTCTTCTTCG TCCGGGACAA CGGGGTCGGC
TTCGACATGG CCTACGCCGG CAAGCTCTTC GGCCCCTTCC AGCGGCTGCA CGCCGAGGAG
GAGTTCGAGG GGACCGGCAT CGGGCTCGCC GCCGTCGCCC GCGTCATAGA GCGCCACGGC
GGCCGGGTCT GGGCCGAGGG CGCCGAAGGG GAGGGGGCGA CCTTCTACTT CACCCTATAA
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| Protein sequence | MDPSSLQGYQ PLVFYAAAAV AGALLAGLAA LLLWRRGRPS RRRDALRAAA FEQAAEGMLL
VSGDRVLEAN AACAALLGRE RGELAGMPLG ELLAGGAGGV PLPPGKRSWS GTLALRSGGG
EPVECEAAAS RVLAGGREAV CLALRDVTER RREEEKLRET ESRYRTLVEQ VPAIVYIEDV
QTQATLYDSP RIEEILGYPR DLCEREPLYW HRILYPEDRE RVLEAEREAV ERGSFVLEYR
VFAADGRVVW VRDEARLLRD ESGEPRFWQG VISDITEQRR AEDALRESEE RYRSLVQLSP
DGVAVESEGR FVYLNEAGAR LLGASSPQEV LGQPVMERVH PDCRENARRR ARRLRRGERV
ELQEERWLRL DGREMDVEVS AAPVQYGGRP SAQLVLRDVT GRKRAEREIV RQKAELARSN
AELEQFAYLI AHDLRAPLRS MDGFAQILLE DCAPRLGPDG REYLARIQRA TRKMARMIDE
LLGLSRLARA DIRREPVDLS AMARSIGEEL RQGEPDRRVE FIVAGGLAAE GDRRLLRVAL
ANLLENAWKF TRRTPRPRIV FGRIERGGER VFFVRDNGVG FDMAYAGKLF GPFQRLHAEE
EFEGTGIGLA AVARVIERHG GRVWAEGAEG EGATFYFTL
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