Gene Rxyl_0089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0089 
Symbol 
ID4117660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp91874 
End bp92797 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content71% 
IMG OID638034882 
ProductABC transporter related 
Protein accessionYP_642881 
Protein GI108802944 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGGAGGG AGATGGGTGC GGTCATCGAG ACCAGCGGGC TCGCCAAGAG CTACGGCAAG 
AGCCGCGGGA TCCGGGGCGT GGACCTCACC GTCCGGGAGG GCGAGGTCTT CGGCTTCCTC
GGGCCCAACG GGGCCGGGAA GACCACCACC ATCCGGCTGC TCATGGGCTT TCTGCGGCCC
AGCGGCGGCA GCGCCCGGGT CTTCGGGTTC GACGTCTGGA GGCAGAGCGT CGAGGTGCGC
TCCCGGGTGG GCAACCTGCC CGGCGAGTTC GCGCTTGAGG ACCGGCTGAC CGGCGAGGAG
CTGCTGCGCT TCTTCGCCCG GCTGCGCGGG GTGGGGGACC TCTCCCACGC GCGCGAGCTC
GCGGAGAGGC TCGGGGCCGA GCTGGGGCGC CCCATGCGCA GGCTCAGCAG GGGGAACAAG
CAGAAGATCG GGCTCATACA GGCCATGTTC CACCGGCCGC CGCTCCTGAT CCTGGACGAG
CCTACGGGCG GCCTCGACCC GCTGGTGCAG GAGGAGTTCC TGGGGATGGT GCGGGAGGTG
AAGGAGGAGG GGCGCACCGT CTTCTTCTCC TCGCACAACC TGGCCGAGGT CGAGCGGGTG
TGCGACCGGG TCGGGATCAT CCGCGAGGGC GAGCTGGTGG CGGTGGAGCC CACCGACGCC
CTGATCGACA AGTCCTTCCG GCACGTGCGG GTGGCCTTCG GGGAGGAGCC CCCGGAGAAG
GAGCTGCGGC GCCTCGCGGG CCTTCCGGGC GTCGAGAACT TCCGGTCGGA GGGTCCCGGG
CGCGTCTCCT TCACCGTGTA CGGGGGCTTC GACGCCGTGA TAAAGCAGCT GGCCCGCCAC
ACGGTGGCGG GCGTGGACTT CGAGCGCCCG AGCCTAGAGG AGGTCTTTCT CGCCTACTAC
GGCGGGAAGG GGGATGGGCG GTGA
 
Protein sequence
MRREMGAVIE TSGLAKSYGK SRGIRGVDLT VREGEVFGFL GPNGAGKTTT IRLLMGFLRP 
SGGSARVFGF DVWRQSVEVR SRVGNLPGEF ALEDRLTGEE LLRFFARLRG VGDLSHAREL
AERLGAELGR PMRRLSRGNK QKIGLIQAMF HRPPLLILDE PTGGLDPLVQ EEFLGMVREV
KEEGRTVFFS SHNLAEVERV CDRVGIIREG ELVAVEPTDA LIDKSFRHVR VAFGEEPPEK
ELRRLAGLPG VENFRSEGPG RVSFTVYGGF DAVIKQLARH TVAGVDFERP SLEEVFLAYY
GGKGDGR