| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0083 |
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| Symbol | |
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| ID | 4117655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 86899 |
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| End bp | 87915 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638034877 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_642876 |
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| Protein GI | 108802939 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2132] Putative multicopper oxidases |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR02376] nitrite reductase, copper-containing |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000323423 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGGGC TGAGGCGGGG TGTATCGCGC CGGGAGTTTC TGCGGGCGGC GGGGGTTGCT
GGAGCGTTGG GGGTTTCGGG CGGTCTCCTT GGGGCTCGGG TTGCCCGGGG GCAGGGAGGT
GGTCACGGGG GGATACGCGG GGAGGCATCG GGCGGGCACG GCGGGAATCG GGTTGTGGGG
GATGTGGATC TTTCGAGGTT CGATCCCTCG AAGTTCCTGA GGGAGTTTTA CTGGGGGGAC
GAGCGCAAAG AGGGCGGGCG CACCGTCCGG GAGTACGAGC TCGTTGCGGA GCCGGTGGAG
ATCGAGGTTG CGCCGGGGGT CATGTACCCG GCGTGGGCGT ACAACGGCCA GGTGCCGGGG
CCTACGCTGA GGGCGCGGGA GGGGGACAGG CTGAGGGTGG CGTTCAAGAA CGGGGACACG
CACCCGCACA CGATCCACTT CCACGGGTTC CACCCGGCCA ACATGGACGG GGTCTTCGAG
CTGGTCGGTC CGGGGCAGGA GTTCGTCTAC GAGTTCGAGG CCGGGCCGTT CGGGTGCCAC
CTCTACCACT GCCACACCAT GCCCCTCAAG AAGCACATCG AGAAGGGGCT CTACGGGGCT
TTCATCGTGG ACCCGAGGGA GGGGCGGCCG GAGGCCGACG AGATGGTGAT GGTCATGAAC
GGCTTCGACA CCGACTTCGA TGGCGAGAAC GAGGTCTATG GGGTAAACAC CGTGGCCTTC
CACTACCAGC GGCATCCGGT AAAGATAAAG CGCGGGGAGC TGGTCAGGAT CTACGTGGTC
AACGCGCTGG AGTTCGACCT CGTAAACAGT TTCCACATCC ATGCCAACTT CTTCGACTAC
TACCCCACGG GCACCAGGCT GGAGCCTTCG GAGTTCACCG ACACCAAGAT GTTCGCCCAG
GGGGAGCGCG GGATCATGGA GTTCCGCTAC CGCTTCCCCG GGCGCTTCAT GTTCCACGCC
CACGTCAGCG AGTTCGCCGA GCTCGGCTGG ATGGGCCTCT TTGAGGTGGA GGGGTGA
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| Protein sequence | MRGLRRGVSR REFLRAAGVA GALGVSGGLL GARVARGQGG GHGGIRGEAS GGHGGNRVVG
DVDLSRFDPS KFLREFYWGD ERKEGGRTVR EYELVAEPVE IEVAPGVMYP AWAYNGQVPG
PTLRAREGDR LRVAFKNGDT HPHTIHFHGF HPANMDGVFE LVGPGQEFVY EFEAGPFGCH
LYHCHTMPLK KHIEKGLYGA FIVDPREGRP EADEMVMVMN GFDTDFDGEN EVYGVNTVAF
HYQRHPVKIK RGELVRIYVV NALEFDLVNS FHIHANFFDY YPTGTRLEPS EFTDTKMFAQ
GERGIMEFRY RFPGRFMFHA HVSEFAELGW MGLFEVEG
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