| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0075 |
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| Symbol | |
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| ID | 4117919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 78454 |
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| End bp | 79704 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638034869 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_642868 |
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| Protein GI | 108802931 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGACGAGT TCCACTACAG GGGGGGCGTC CTGCACTGCG AGGACGTCCC GCTGCACGAG
ATAGCCCGCG GCGCCGGCAC GCCGGCCTAC GTCTACAGCT ACGCGGCCCT GGAGCGGGCC
TACCGGGAGG TGGAGGAGGC TTTCTCCGGG CTCGACCACC TGGTCTGCTT CGCGGTGAAG
GCTAACGGCA ACCTGGCGGT GCTGCGGGCC CTGGCCTCGC TCGGCGCCGG GGCGGACATC
GTCTCCGGGG GGGAGCTCTA CCGGGCCATG CGGGCCGGGT TCGACCCGAA GAAGGTGGTC
TTCGCCGGGG TGGGCAAGAC GGAGCAGGAG CTGAAGGCCG GGCTCGGGGA GCGCATCCTG
ATGTTCAACG TGGAGTCGGC CGGGGAGCTG GAGCACCTGG AGCGGCTGGC GCACCTGCAC
GGCAAGCGGG CCCGGGTCGC CCTGCGGATA AACCCCGGCG TCGACCCCGG CACCCACGAG
CACATCTCCA CGGGCAACGT GGAGAGCAAG TTCGGCATCC CCGCCGACGA GGCGCTCTCG
CTCGCCGAGC GGGCGAAGGG CTTCAGGTGC GTGGACCTGA TCGGGGTCCA CCAGCATATC
GGGTCGCAGA TCGTGAAGGT CGCCCCCTAC GTGGAGTCGG TGGAGAGGAG CGCGGCGCTG
GTGGACGAGC TGCGCAGCCG CGGCTTCGAT ATCCGCTACC TGAACATCGG CGGGGGGCTC
GGGATCCGCT ACCGGGACGA GGAGACCCCC TCCCCGGCCG AGCTGGTCGA GGCCATCCGG
CCGACCCTCG CCGCCTCGGG GGCGAAGATC CTGTGCGAGA TGGGCCGCTA CATCGCCGGG
CCCGCAGGGG CCCTGCTCAC CGGCGTCCTG TACCGCAAGC GGAGCGGCGA GAGGAGCTTC
ATCGTCGCCG ACGCCGGGAT GAACGACCTG ATCCGCCCGA GCCTCTACGG CGCCTACCAC
GAAGTCCTCC CGCTGGACGA GGGCGCCGAC CAGACCCGCG CAGACCTGGT CGGTCCGGTC
TGCGAGAGCG GGGACTTCCT CGCCCGCGAC CGCGACCTGC CCGACGCCCG CGAGGGCGAC
GTGCTGGCGG TCATGAACGC CGGAGCCTAC GGCTTCTCGA TGGCCTCCAA CTACAACTCC
CGCCCCCGCC CCGCAGAGGT GCTCGTCCGC GAAGACCGCT GGGCCGTCGT CCGCGAGCGG
GAGCACTACC CCGACCTGAT CCGGGGCGAG CTCGTCCCAG CCTTCCTCTA G
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| Protein sequence | MDEFHYRGGV LHCEDVPLHE IARGAGTPAY VYSYAALERA YREVEEAFSG LDHLVCFAVK
ANGNLAVLRA LASLGAGADI VSGGELYRAM RAGFDPKKVV FAGVGKTEQE LKAGLGERIL
MFNVESAGEL EHLERLAHLH GKRARVALRI NPGVDPGTHE HISTGNVESK FGIPADEALS
LAERAKGFRC VDLIGVHQHI GSQIVKVAPY VESVERSAAL VDELRSRGFD IRYLNIGGGL
GIRYRDEETP SPAELVEAIR PTLAASGAKI LCEMGRYIAG PAGALLTGVL YRKRSGERSF
IVADAGMNDL IRPSLYGAYH EVLPLDEGAD QTRADLVGPV CESGDFLARD RDLPDAREGD
VLAVMNAGAY GFSMASNYNS RPRPAEVLVR EDRWAVVRER EHYPDLIRGE LVPAFL
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