| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0074 |
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| Symbol | |
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| ID | 4117918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 77177 |
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| End bp | 78394 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638034868 |
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| Product | aminotransferase |
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| Protein accession | YP_642867 |
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| Protein GI | 108802930 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03537] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTATATT TCTGGCCGGC AGCGGAAGAG AACCGACCCC TAGGGGGACT ATACCCTGTG
AGAAAAGCCG ACGCGACCCC TCTCCGGCTC AACCCGGTCC TCGAGCGGCA GGGAGAGTAC
CCGCTCCTGC GCCTCGACGA GCGGCGCGAG CGGCTGAAAG AGCAGGGCGT CCGGCTCTTC
GACTTCGGCG CGGGCGACCC GCGGGAGCCC ACGGACCCCA GGATCCGGCG GGCCCTCCTC
GAGGCGGTCC CCGAGGTGAG CCAGTACCCC AGCGCCTCCG GAACGCGCGC CCTGCGCGAG
GCCTTCTGCG GCTGGATGGA GCGGCGGCAC GGGGTGGAGC TGGACCCCGA CGCCGAGGTG
CTCCCGGCCT CCGGCTCCAA AGAGGCCATC TTCCACGCCC ACCTGCCCTT CCTGCACCAC
ACCCACGAGC GGCGCGGGGT AGCCTACGGC ACCCCCGGCT ACCCCGTCTA CGAGCGGGGG
GCGCTGTTCG CCGGGGGGGA GGCGCTCCCC GTGCGGCTCG TTCGCGAGGA CGGCTTTCTG
CTCCCCCTCG AGGCCGTGGA CCCGCAGAGG ACCCGCATCC TGTGGCTCAA CTACCCCCAC
AACCCCACCG GGGCCCGGGC GCCGCGCTCC TACCTCGAGG AGGCGGCCGC CTTCTGTCGG
GAGCACGACA TCCTGCTCTT CTCCGACGAG TGCTACAACG AGATCTACTC CGGCGACCCG
CCGCCCTCGG TGCTGGAGGT GAGCCGGGAG CGCACCCTCG CCTTCTGTTC CCTCTCCAAG
CGCAGCGGCA TGACCGGCTA CCGCTCGGCC ATGATGGCCG GGGACGCCGA GCTCATCTCC
GCCCTCGGGA AGCTGCGCCC CTCGGTGGGG GTGGCCTCCC CCTCCTTTGT CCAGGCGGCG
GCCGCCGCCG CCTGGTCCGA CGACGAGCAC GTCGAGGAGC GCCGCCGCAC CTTCGCCAGA
AAGCGGGGGC TCTTCGTGGA GTTCTTCCGG CGTGCGGGGC TGGACTTCCT GCCCACCGAC
GCCACCTTCT ACCTCTGGGT GGCCGTCCCG GGCGGCGACG ACGAGGCCTA CGCCCTCCGG
CTGCTGGAGG AGGGCATCGT GGTGGCCCCG GGGAGGTCCT TCGGCCCCGG CGGCGAGGGG
TACGTCCGCG TGGCGCTCGT CCCCTCCCTC GAGGAGTGCG AGGAGGCCGT GCGGCGGTGG
GAGGCCCTGG CGGCCTAG
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| Protein sequence | MVYFWPAAEE NRPLGGLYPV RKADATPLRL NPVLERQGEY PLLRLDERRE RLKEQGVRLF
DFGAGDPREP TDPRIRRALL EAVPEVSQYP SASGTRALRE AFCGWMERRH GVELDPDAEV
LPASGSKEAI FHAHLPFLHH THERRGVAYG TPGYPVYERG ALFAGGEALP VRLVREDGFL
LPLEAVDPQR TRILWLNYPH NPTGARAPRS YLEEAAAFCR EHDILLFSDE CYNEIYSGDP
PPSVLEVSRE RTLAFCSLSK RSGMTGYRSA MMAGDAELIS ALGKLRPSVG VASPSFVQAA
AAAAWSDDEH VEERRRTFAR KRGLFVEFFR RAGLDFLPTD ATFYLWVAVP GGDDEAYALR
LLEEGIVVAP GRSFGPGGEG YVRVALVPSL EECEEAVRRW EALAA
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