| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0073 |
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| Symbol | dapD |
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| ID | 4117917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 76310 |
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| End bp | 77119 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638034867 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_642866 |
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| Protein GI | 108802929 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAGAGC TCATAGAGGA GGCCTTCGAG AACAGGGATC TGCTCAAAAG CAGCGAGGAG
CACCGCGCCG CCGTCTTCGA GACGGTGGCG GCCCTGGACC GCGGCGAGCT CAGGGTCGCG
GAGAAGAAGG ACGGCGGGTG GCGCTCCAAC GCCTGGGTCA TGCAGGCCAT AAACCTCTAC
TTCGTCCTCG CCGAGATGAA GACCATAACG GCGGGCCCCC TCGAGTTCCA CGACAAGATC
CCCACCAAGA AGAACCTCGC CGAGGCGGGC GTGCGCGTCG TGCCCCCCGG CACCATCCGC
TACGGGGCCT TCGCCGAGCC CGGGGTGGTC CTCATGCCCG GCTACATCAA CATCGGGGCC
TACGTTGGGA GCGGGACGAT GGTCGACACC TGGGCCACCG TGGGCTCCGG CGCCCAGATA
GGCCGCAACG TCCACCTCTC CGGGGGCGTG GGCATCGGCG GGGTGCTCGA GCCCCCCGGC
GCCATGCCCG TCGTGATCGA GGACGGGGCG TTTATCGGGT CGCGGGCCGT CGTCGTGGAG
GGCGTGCGGG TCGAGGAGGA GGCGGTCCTG GGGGCGAACG TGGTGCTCAC CGCCTCCACC
CCCATCATCG ACGTCACCGG CGAGGAGGAG AAGGTCTACC GCGGGCGGGT CCCCGCCCGT
TCGGTGGTCG TCGCCGGGAC CCGCACCAGG GAGTTCCCCG CGGGCTCCTA CCAGCTGCAG
GCCGCGCTCA TCATCGGCAG GCGGCGCGCC TCGACCGACC GGAAGACCTC GCTCAACGAG
GCGCTGCGGC AGTTCGGGGT CTCGGTGTGA
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| Protein sequence | MRELIEEAFE NRDLLKSSEE HRAAVFETVA ALDRGELRVA EKKDGGWRSN AWVMQAINLY
FVLAEMKTIT AGPLEFHDKI PTKKNLAEAG VRVVPPGTIR YGAFAEPGVV LMPGYINIGA
YVGSGTMVDT WATVGSGAQI GRNVHLSGGV GIGGVLEPPG AMPVVIEDGA FIGSRAVVVE
GVRVEEEAVL GANVVLTAST PIIDVTGEEE KVYRGRVPAR SVVVAGTRTR EFPAGSYQLQ
AALIIGRRRA STDRKTSLNE ALRQFGVSV
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