Gene Rxyl_0050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0050 
Symbol 
ID4117739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand+ 
Start bp51418 
End bp52335 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content72% 
IMG OID638034844 
Product6-phosphogluconate dehydrogenase-like protein 
Protein accessionYP_642843 
Protein GI108802906 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1023] Predicted 6-phosphogluconate dehydrogenase 
TIGRFAM ID[TIGR00872] 6-phosphogluconate dehydrogenase (decarboxylating)
[TIGR00873] 6-phosphogluconate dehydrogenase, decarboxylating 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGATAG GCATCTACGG GCTAGGGAGG ATGGGCGCCA ACATGGTGCG CCGGCTCCTC 
CGGAGCGGGG AGCACCGGGT CGTCGCCGGC AACCGCTCGC CGGGGCCGGT GGACGAGGCG 
GCGAAGGAGG GCGCCGAGGG CGCCTACTCC ATGCAGGAGC TGGTGGACAA GCTCGAGCCC 
CCGCGGGTCA TCTGGAGCAT GGTGCCCGCC GGGGAGCCCA CCGAGAAGAC CCTCATGGGC 
TTCGCCGAGC TCGCGCAGGA GGGCGACATC CTCATCGACG GCGGCAACTC GTACTTCAGG 
GACTCGGTGC GCCGGGCCTC CGCGCTGCGC GAGAGGGGGC TGCGCTTCCT GGACGCCGGG 
ACCTCCGGCG GCATCTGGGG GCTCGAGGTC GGCTACTGCC TGATGGTCGG CGGCGACAGG 
AGCGCCTTCG AGCACGTCGA GCCCGCGCTC AAGACCCTCG CCCCGCCCGA CGGCTACGCC 
TACCTGGGCG AGGCCGGGGC CGGGCACTTC GCCAAGATGG TCCACAACGG GGTGGAGTAC 
GCCATGCTGC AGGCCTACGC CGAGGGCTTC GAGATCCTCA AGAAGAGCCC CTACGGCTAC 
GACCTGCGGG CCCTCTCCAG CCTGTGGAAC CACGGCAGCG TGGTGCGCAG CTGGCTGCTG 
GAGCTCGCCG AGCGGGCCTT CGAGAAGGAC GCCGAGCTGC AGAGCATCCG GGGCTACGTC 
GAGGACTCCG GGGAGGGCCG GTGGACGGTG CTCGAGGCCA TCGAGGAGGA CGTGCCCGCC 
AACGCCATCG CCGGGGCGCT CTTCGCCCGG TTCGCCTCGC GGCAGGAGGA CTCCTTCGCG 
ATGAAGGTGA TCGCGGCGCT GCGCCGCGAG TTCGGGGGGC ACGCCGTGAA GGAGGCCGGG 
CCGGGCGGCG GGGGATGA
 
Protein sequence
MEIGIYGLGR MGANMVRRLL RSGEHRVVAG NRSPGPVDEA AKEGAEGAYS MQELVDKLEP 
PRVIWSMVPA GEPTEKTLMG FAELAQEGDI LIDGGNSYFR DSVRRASALR ERGLRFLDAG 
TSGGIWGLEV GYCLMVGGDR SAFEHVEPAL KTLAPPDGYA YLGEAGAGHF AKMVHNGVEY 
AMLQAYAEGF EILKKSPYGY DLRALSSLWN HGSVVRSWLL ELAERAFEKD AELQSIRGYV 
EDSGEGRWTV LEAIEEDVPA NAIAGALFAR FASRQEDSFA MKVIAALRRE FGGHAVKEAG 
PGGGG