Gene Rxyl_0043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0043 
Symbol 
ID4117732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp44402 
End bp45193 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content73% 
IMG OID638034837 
Producthypothetical protein 
Protein accessionYP_642836 
Protein GI108802899 
COG category[S] Function unknown 
COG ID[COG3503] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGTCCGGT GGCCTCCGGT GCCTCTCGCG GCGGCCGGGA AGGGCGGGGG CAGGTACTGG 
GACGTCGACG CCGCCCGGGG GGTGGCCATG GGCATGGTGG TCCTCTACCA CCTCGTCTTC
GACCTGGACA ACTTCGGCGG CTACCCAATA GCCTCCACCT CCGGGTTCTG GGCCGCCTTC
GCGGACGCCA GCGCCTTCGT GTTCGTGTTT CTGGCCGGGC TCTCGCTCAC GCTGAGCTAC
CGGAGGGCCG CCAGGCCCAC CTTCGGCAAG TACCTGCGGC GGGGGCTGAG GATCTTCGCC
TACGGCATGC TCATCACGCT GGCCTTCCGC CTGGTGGACT ACGGGTACGT GATCTTCGGG
ATCCTGCACC TCATCGGGGC CTCCATCGTC CTGGCCTACC CCTTTCTGCG GCTGCGGTGG
GCCAATTTGC CCCTCGGGCT CCTCGTCATC GCCCTCGGGG CCTACGTCGG CGCGCGGGAC
TTCGCGGCCG GCGGCGCGGC CGGGGTGCTG CTCGCCCCGC TCGGGGTGCT GCCCGAGGGG
GTCATGATGC CCGACTACCG GCCGCTGCTG CCCTGGTTCG GGGTGGTGCT GCTCGGGGTC
TTCGCCGGCA ACGCCGCCTA CCTGCCGTGG CGGGAGCGGC GCCCGCCCGG CGGGCCGCCC
GGTCCCGCCG CGGGCGCCCT GGCCCTCGTC GGGAGGAACA CCCTCCTTAT CTACCTGGTC
CACCAGCCCG TGCTCCTCGC CGTCCTGTGG GCGCTCGGCG TGCTCGCTCC GCCGGGGGTG
GCGGGGCGGT GA
 
Protein sequence
MVRWPPVPLA AAGKGGGRYW DVDAARGVAM GMVVLYHLVF DLDNFGGYPI ASTSGFWAAF 
ADASAFVFVF LAGLSLTLSY RRAARPTFGK YLRRGLRIFA YGMLITLAFR LVDYGYVIFG
ILHLIGASIV LAYPFLRLRW ANLPLGLLVI ALGAYVGARD FAAGGAAGVL LAPLGVLPEG
VMMPDYRPLL PWFGVVLLGV FAGNAAYLPW RERRPPGGPP GPAAGALALV GRNTLLIYLV
HQPVLLAVLW ALGVLAPPGV AGR