| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0019 |
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| Symbol | |
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| ID | 4115678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 18805 |
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| End bp | 21246 |
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| Gene Length | 2442 bp |
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| Protein Length | 813 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638034812 |
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| Product | beta-lactamase-like protein |
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| Protein accession | YP_642812 |
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| Protein GI | 108802875 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGATA CCACACCCAG CGGTGGAGAC GTTAGGGACG CGCAAAAGAA GCCCCCGCCG
CAGGTGCCTC CCGAGAACGT GCCCGAGGAG CTTCTGCGGC GGCGGCTCGG CAGGCTGGAC
ACCCGCAGGG CGCTGGCGGA GCTGTGCAAG AGCGTGCCGG GGCTGGAGGA GGCGCTGCTA
CCGCCCGGCA TCCAGGCCGA CGCCCTCACC CGCCGGTCGG GCAGCTCCCA GATGCTGCGC
AGCGTGGCCC GCAGGATAAA GCAGGACGCC GCGGCGTGGA ACGCCTTCAA GACGGCCGTG
GTGGAGCAGA TCCCGCCGGA GACCGGCGAG GCTGTGGGGC GCCTCTCCGG GGACAACCTC
GACGAGCTGC GCGAGGCGCA CACCACGGAG GGCCTGCTGC TGGCGGCGCT CGTCTCCGAG
AACGGGGTCG AGCCCGGCCT TCTCGACTCG CTGGTAGAGA GCTGGGAGGA GGAGAACCGG
CGGGAGGAGA AGAAGGCCCA CCAGGACGCC AAGGTAAAGG AGCTCGAGTC CCGGCTGGAG
GAGCTCAAGA AGGACAACGA GCGCCTCTCC TTCGCCTCCC GGGCCGCCAA GGAGCGGGCC
GAGTCGCTGG CCGAGGAGGT GCGCCTGCTG ACCAGCGAGC GGGAGGACGT CTCGGCCAGG
GTGCGGGAGG CCGAGGAGCG GGCGCGCGCG GCGCTCAGCG TCCGGGAGAG GCTCGACGAG
AGGATCGCCG AGCTCGAGCG GCGCGGGGCC CAGCTGGAGC GGGCGCTCGA GGGCGAGCGG
CGGGCCTACG CCCGGGCCGC CGAGCGGCTG GAGGAGCTGC ACGCCGAGTT CGAGCGGGTG
GTGGCGGAGA GGGACCAGAT CCGGGACGCG CTCCGTCACG CCCGGTTCAC GGACGAGGGC
TTCGGCGAGC TGCTCGTACG GGCCGTGAAG AACGAGGTCG AGGCGCTGCC GGACACCCTG
GACTCGACCG CCCGGACGGC GCGTCTGCTG GAGTTCATGA GCAGGGTGCT CCAGGCCCAC
GCCGAGCTGC GCGGGGGCAG GGAGCGGCGG CCCTCCCCGG CGCCCGCGCG CGAGGAGGAG
GGCGAGGAGT CGGGACCAGC CCCCCGGGCG GGCCGGCCGC GGCCGGCAAC GGGCGACGCC
CTCCGGTCCG TCCGGGTGAA GTCCCGCCCG ACGCTGGCGT TCAGGGCGCT CGGTGGGGCC
GGGGAGGTCG GCGGCAGCAG CCACCTCCTG GACTTCGGGA GCACCCGGGT GCTGGTGGAC
GCCGGCATCA AGCCTGACGG GCGGGGGCAG CTCGCGCCGG ACTTCGAGGA GATCGGGCCG
CTGGACGGGG CGATCATAAC CCACGCCCAC CTGGACCACT GCGGGGCGCT GCCGCTGCTG
GTCAAGAACC ACCCGCAGCT TCCCATCTAC TGCACCCCGC CCTCGGCGAA GCTCATCGTG
AGCGCCCTCA ACGACCACGC GGCGATGGGC GGCGGGGTTC CGGGCGGCGC CCCCATACAC
GAGGTGAAGA AGCGGCTCGT CTCCGTGCCC TTCGGCAAGC CCTTCGAGGT GGGCGGCGCC
ACGGTCACCC TCACCGAGAG CGGCCACATC CTGGGGGCGG CCAGCGTGCT GCTCAGGAGC
AGCTCGGCGA TGGTCTTCCA CACCGGGGAC ATCTGCATGG AGGACCACTT CTCCATCCCC
CCGGCCCGGC TGCCGGAGGT GAGCGGGATA GACCTGCTCA TCATGGAGGC CACGCTGGCC
GACCAGCGGC CCCAGCCGTT CAACGAGTCC ATAAAGAAGA TGGTGCGGGT CATAAACGAG
ACCACCCTCG AGCGCGGGGG GACGGTCCTG ATCCCCACCT ACGCCCTGGG GCAGGCGCAG
GAGATAATCC TCGGCCTCAA GTACTTCGGC AAGGAGCACG GGCTGGAGCG CGACGTGTTC
ATCTACGTGG ACGGCTCGGT CGTCACCACC TCCGAGCGGC TCTACGCCGA GCAGCTGCGC
TACATGAAGC CCTACCTGCA GCACACCGAC CCGCGGGAGC TGTTCTTCAG CGAGAACATC
CGGGCGGTCG CCAACGACGA CCGGGCGCGG GAGCGGATCC TGGCGAACCC CTGCGCGATC
ATCGCCTCCC CGGTCACCAT GGAGGGCGGG GCGAGCGCCT TCTACCGCCG CCGGCTGGAG
GGGAGCGAGC GCAACGCGGT GATCCTCCCG TCCAACGCCG CCTCCTCCTA CGGGACCCAC
CGGGCCATCG GCGAGGGGAG CAGCTGGCGG GTGGAGCGGG TGAGCTTCGC CGCCCACTGC
ACCCAGGAGG AGCTGCTGGG GATCACCGAG AAGCTCTCGC CGCGCCAGAT CATCCTGATC
CACGGCTCCA GGCGCCGCAT CAGCGACCTG GCCTTCCGGC TGGCGCCGAA GCACAAGATC
CACACCCCGG CGGTGGGCGA GACGGTGCGC ACGGTGCTCT AG
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| Protein sequence | MSDTTPSGGD VRDAQKKPPP QVPPENVPEE LLRRRLGRLD TRRALAELCK SVPGLEEALL
PPGIQADALT RRSGSSQMLR SVARRIKQDA AAWNAFKTAV VEQIPPETGE AVGRLSGDNL
DELREAHTTE GLLLAALVSE NGVEPGLLDS LVESWEEENR REEKKAHQDA KVKELESRLE
ELKKDNERLS FASRAAKERA ESLAEEVRLL TSEREDVSAR VREAEERARA ALSVRERLDE
RIAELERRGA QLERALEGER RAYARAAERL EELHAEFERV VAERDQIRDA LRHARFTDEG
FGELLVRAVK NEVEALPDTL DSTARTARLL EFMSRVLQAH AELRGGRERR PSPAPAREEE
GEESGPAPRA GRPRPATGDA LRSVRVKSRP TLAFRALGGA GEVGGSSHLL DFGSTRVLVD
AGIKPDGRGQ LAPDFEEIGP LDGAIITHAH LDHCGALPLL VKNHPQLPIY CTPPSAKLIV
SALNDHAAMG GGVPGGAPIH EVKKRLVSVP FGKPFEVGGA TVTLTESGHI LGAASVLLRS
SSAMVFHTGD ICMEDHFSIP PARLPEVSGI DLLIMEATLA DQRPQPFNES IKKMVRVINE
TTLERGGTVL IPTYALGQAQ EIILGLKYFG KEHGLERDVF IYVDGSVVTT SERLYAEQLR
YMKPYLQHTD PRELFFSENI RAVANDDRAR ERILANPCAI IASPVTMEGG ASAFYRRRLE
GSERNAVILP SNAASSYGTH RAIGEGSSWR VERVSFAAHC TQEELLGITE KLSPRQIILI
HGSRRRISDL AFRLAPKHKI HTPAVGETVR TVL
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