| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0011 |
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| Symbol | sdhA |
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| ID | 4115670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 12630 |
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| End bp | 14399 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638034803 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_642804 |
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| Protein GI | 108802867 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAGTGG AGACCAACGG CAGGCGCGAG GACTACGAGG TCCGCGAGCA CGACGTCCTG
GTCATCGGGG CCGGCGGCGC GGGCCTGCGG GCGGCCATAG CCGCGGCGCA GCGGGGGTTG
TCCGTGGGGG TCGTCACCAA GAGCCTTCTC GGCAAGGCCC ACACCGTCAT GGCCGAGGGG
GGGATCGCCG CTGCTCTCGG CAACGTGGAC CCCGACGACA GCTGGGAGCA GCACTTCATC
GACACGATGA AGAGCGGCAA GTTCCTCAAC AACTGGCGGA AGGTCGAGAT CTACGCCAAG
GAGGCCCCCG CCGGGGTCAT AGAGCTCGAG CAGTGGGGGG CGCTCTTCAA CCGGACGCCG
GAGGGCAAGA TCTCGCAGCG GCCCTTCGGC GGGCACACCT ACCGGCGGCT CGCGCACGTC
GGCGACCGCA CCGGGCTGGA GATGATCCGG ACCCTGCAGG AGAAGCTGCT CGCCACCGAC
GCCAGGGTCT ACATGGAGAC CACGGTCACC AAGCTGTTCA AGGACGAGCG GGGGCGCATC
TCCGGCGCCT TGGCCTACAC CCGCGAGTCG GGCAGGTTCG TCTTCTTCAA GGTCAAGGCC
ATCATCATGG CGACCGGCGG CTGGGGGCGC ATCTACAAGG TCACCTCCAA CTCCTGGGAG
GGGACGGGGG ACGGCGTGAT CCTGGCCTAC GACGCCGGGG CCGAGCTGGT GGACATGGAG
ATGGTCCAGT TCCATCCCAC GGGGATGGTC TGGCCTCCCG GGGTGCGCGG CATCCTGGTC
ACCGAGGGCG TCCGCGGCGA GGGCGGCATC CTGCGCAACT CCAGGGGCGA GCGCTTTATG
GAGCGCTACG ACCCCGAGCG GAAGGAGCTC TCCACCCGTG ACGTGGTGGC GCGGGCCAAC
TACACCGAGG TGCAGGAGGG AAGGGGCTCG CCGCACGGGG GGGTCTACCT GGACATCACC
CACCTCGGGC GCGAGAAGAT CCTCAAGAAG CTGCCCACCA TGTACGAGCA GTTCCTCAAG
CTCGCGGACG TGGACATCAC CAGGGAGCCC ATGGAGGTCT TCCCGACGGT CCACTACAAC
ATGGGCGGCA TAAAGGTGGA GCCCGAGAGC TGCGCGAGCA CCACGGTGCC GGGGCTGTTC
GCCGCCGGCG AGGTGGCCGG GGGGCTGCAC GGGGCCAACC GCCTCGGCGG GAACTCGCTC
GGGGACCTTC TGGTCTTCGG GCGGCGCGCC GGGGAGGGCG CCGCGGAGTA CATCGAGCAG
AGCGTGCACG CCGCGGGCGC GCCCGACGAG GAGATACAGG AGGAGATAAG GCGGGTTCTG
GAGCCGCTCG AGAGGCCGGC CCGCGAGGGC GACGAGAGCC CCTACCTGCT GCAGGAGGAG
CTGCAGGAGG CGATGATGGA GCACGCCAAC CTGATGCGCG ACGAGGACTC CCTCCTGAAG
GGGCTCGAGA AGGTGCTCTC CATCAAGCGG CGCCTCCCCA ACGTCAAGGT GGGGGGCACC
CGGATGTTCA ACCCGGGGTG GCACACCGCC CAGGACATCC GCTACCTGAC CCAGATCTCC
GAGATCATCA TCCGCTGCGC GCTCGAGCGC AAGGAGAAGC GGGGGGCCCA GTGGCGCCTC
GACTGCGACG AGCTCGTCGA GGAGTACGGC AAGATCAACT TCGTCGTCAA GAAGACCGAG
CAGGGCGAGG TGGGCATCGA GCGGCGCGAG ATACCGCCGA TGCCCGAGCA CCTGGCCGCG
CTGTTCAGGG AGGAGAAGGC CAAGGTATGA
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| Protein sequence | MAVETNGRRE DYEVREHDVL VIGAGGAGLR AAIAAAQRGL SVGVVTKSLL GKAHTVMAEG
GIAAALGNVD PDDSWEQHFI DTMKSGKFLN NWRKVEIYAK EAPAGVIELE QWGALFNRTP
EGKISQRPFG GHTYRRLAHV GDRTGLEMIR TLQEKLLATD ARVYMETTVT KLFKDERGRI
SGALAYTRES GRFVFFKVKA IIMATGGWGR IYKVTSNSWE GTGDGVILAY DAGAELVDME
MVQFHPTGMV WPPGVRGILV TEGVRGEGGI LRNSRGERFM ERYDPERKEL STRDVVARAN
YTEVQEGRGS PHGGVYLDIT HLGREKILKK LPTMYEQFLK LADVDITREP MEVFPTVHYN
MGGIKVEPES CASTTVPGLF AAGEVAGGLH GANRLGGNSL GDLLVFGRRA GEGAAEYIEQ
SVHAAGAPDE EIQEEIRRVL EPLERPAREG DESPYLLQEE LQEAMMEHAN LMRDEDSLLK
GLEKVLSIKR RLPNVKVGGT RMFNPGWHTA QDIRYLTQIS EIIIRCALER KEKRGAQWRL
DCDELVEEYG KINFVVKKTE QGEVGIERRE IPPMPEHLAA LFREEKAKV
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