Gene Rxyl_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0006 
Symbol 
ID4115665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp6385 
End bp8943 
Gene Length2559 bp 
Protein Length852 aa 
Translation table11 
GC content68% 
IMG OID638034798 
ProductDNA gyrase subunit A 
Protein accessionYP_642799 
Protein GI108802862 
COG category[L] Replication, recombination and repair 
COG ID[COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 
TIGRFAM ID[TIGR01063] DNA gyrase, A subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGACA CCTTCTCGGG CAACATCCAG CCGCACTCCA TAGAGGACGA GATCCGCTCG 
TCCTTCCTCT CCTACGCGAT GAGCGTGATC GTCTCGCGGG CGCTGCCGGA CGTGCGGGAC
GGTCTCAAGC CGGTGCACCG GCGGGTGCTC TACGCGATGC ACGACCTGGG GCTGCAGCCC
AACCGCCCCT ACCGCAAGAG CGCCACGGTC GTCGGCGAGG TGATCGGTAA GTACCACCCG
CACGGGGACG CGGCGGTCTA CGACACGCTG GTGCGTCTGG CCCAGGACTT CTCCATGCGC
CACCCCCTGG TGGACGGCCA GGGGAACTTC GGGAGCGTGG ACGGCGACCC GGCGGCGGCC
ATGCGCTACA CCGAGGCGCG CCTCACCAGG ATCGCCACCG AGATGCTGCG GGACATAAAC
GCCGACACGG TCAACTTCGT CCCCAACTTC GACGAGAGCC AGCGGGAGCC GGAGGTGCTG
CCCGCCCGGT TCCCGAACCT GCTCGTCAAC GGGGCCGACG GGATCGCGGT CGGGATGGCG
ACCAAGATCC CGCCGCACAA CCTGGGCGAG GTGATCGACG CCACGGTGGC GCTCATCGAG
GATCCGGAGC TCGACGACGA GGGCCTGGCG CGCTACATAA AGGGCCCGGA CTTCCCGACC
GGTGGCATAG TGGTGGGCAC CCGCGGCATA CGGGAGGCCA TCCGCACGGG CCGGGGCTCG
GTGCGGGTGC GGGCCAAGGC ACACACCGAG CAGATAAAGG GCAACCGGAC CCAGATAGTC
GTCACCGAGC TGCCCTACCA GGTGAACAAG GCGCAGCTCC TGCAGAAGAT CGCGGAGCTT
GTCAAGGACC GGAAGATCTC CGACATCGCC GACCTGCGGG ACGAGTCCGA CCGCGGCGGG
ATGCGGATCG TGATCGAGCT CAAGAGAGAG GCCGTCCCCA AGGTGGTGCT GAACAACCTG
TTCAAGCACA CCCAGATGCA GCAGAGCTTC GGGGTGAACC TGGTGGCGCT GGTGGACGGG
GTGCCGAAGA CCCTCTCCTA CAAGGAGGCC CTCCGGCACT ACATCGCCCA CCAGTTCGAG
GTCGTGACCC GCAGGACGCG CCACGAGCTG GGGCGCGCCC GCGCGCGGGC GCACATCCTG
GAGGGGCTGC TCATCGCGCT CTCCAACCTG GACGAGGTGG TCGAGACCAT CCGGCGCTCG
CGCAACGTGG AGACCGCGCG CAGGAACCTG GTGAAGCGGT TCAGGCTCTC GGAGCGCCAG
GCGCAGGCCA TCCTGGACCT CAGGCTGCAG CGGCTGACCG CCCTCGAGCG GCGCAAGGTG
GAGCAGGACC ACCGCGACCT CGTGGAGAAG ATCGAGTACC TGGAGGGCGT GCTCGCCGAC
GAGTCGAAGG TCTACGGGAT CATCAGGGAG GAACTGCTCG AGATAAAGGC CGCCTACGCC
GACGAGCGCA GGACGGCCAT CACCGCCCAG GAGGGGGCGG AGTTCGAGGT GGAGGACCTC
ATCGCCGAGG AGGAGATGGT GATCTCCATC TCCCACGAGG GGTATCTCAA GAGCGTGCCC
ATAGGCTCCT TCCGCAAGCA GGGCCGGGGC GGCGTGGGGG TCGCCGGGAT GGAGCTGAAG
GAGGGCGACT ACATCGAGCA CCTCTTCATC ACCACCACCC ACCACTACAT GCTCTTCTTC
ACCAACAGGG GCAAGGTCTA CCGCCTGAAG GTCCACCAGC TGCCGCGGAT GGGCCGGGCG
GCCAAGGGCC GCCACGTCGC CAACCTGCTG CCGCTCGCCC CGGGCGAGCG GATAGCCGCC
GTGATCTCCA CGCGCGACTT CGACGAGGCC GAGTACCTGC TCTTCGCCAC CCGGCGGGGC
ATGGTCAAGA AGACCCCCTT CCGCGACTAC AACACCCCGC TCAAGAACGA GGGGATTATC
GCCATAAAGC TCGCCGGCGG GGACGAGCTC ATCGCCGTCC GCCACGCCTC TGACGAGGAC
GAGGTCGTCT TCGTCACCCG GGACGGCAAG GGGCTCCGCT TCCGGCAGGG CGACGTGCGC
CCCATGGGCC GGGCCACCGC CGGGGTCAAG GGGATCACGC TCAAGGGCGA CGACGCCCTG
CTCTCCATGG ACGTGGTCTC CGACGAGGCC GCCGACCTCT TCATGGTCAC CGAGAAGGGC
TTCGGCAAGC GCACCGCCAT CTCCGAGTTC CGGCCCCAGG GGCGCGGGGG GCAGGGCGTG
ATCGCCATGA AGGTCAACGG CGAGCGGGGC AAGATCGCCG GCGTCCAGGT GGTCCGCCCC
GGGTTGCACG AGCTCGTGAT AGTCTCCAAT ATGGGGACCA CCATCAGGAT AGACAGCGAC
TCGGTCCCCC GGCAGGGGCG CGCCGCGCAG GGGGTGCGGG TGATGAACCT GCGCGAGGGC
GACTCGGTGA GCGCCCTCGC CAAGGTGGTC TCCTCCCGCG GCGAGCCGGG GGAGCCGGAC
GAGCTGGCGC TCGATGGTAT AACGGAGGAG GAAGCGGAAC GTTCCGCGAC CGGGAGCCGC
CCCGCGCCGG CCGCGAACGG CGGGAGGAAG CGTGGATAA
 
Protein sequence
MLDTFSGNIQ PHSIEDEIRS SFLSYAMSVI VSRALPDVRD GLKPVHRRVL YAMHDLGLQP 
NRPYRKSATV VGEVIGKYHP HGDAAVYDTL VRLAQDFSMR HPLVDGQGNF GSVDGDPAAA
MRYTEARLTR IATEMLRDIN ADTVNFVPNF DESQREPEVL PARFPNLLVN GADGIAVGMA
TKIPPHNLGE VIDATVALIE DPELDDEGLA RYIKGPDFPT GGIVVGTRGI REAIRTGRGS
VRVRAKAHTE QIKGNRTQIV VTELPYQVNK AQLLQKIAEL VKDRKISDIA DLRDESDRGG
MRIVIELKRE AVPKVVLNNL FKHTQMQQSF GVNLVALVDG VPKTLSYKEA LRHYIAHQFE
VVTRRTRHEL GRARARAHIL EGLLIALSNL DEVVETIRRS RNVETARRNL VKRFRLSERQ
AQAILDLRLQ RLTALERRKV EQDHRDLVEK IEYLEGVLAD ESKVYGIIRE ELLEIKAAYA
DERRTAITAQ EGAEFEVEDL IAEEEMVISI SHEGYLKSVP IGSFRKQGRG GVGVAGMELK
EGDYIEHLFI TTTHHYMLFF TNRGKVYRLK VHQLPRMGRA AKGRHVANLL PLAPGERIAA
VISTRDFDEA EYLLFATRRG MVKKTPFRDY NTPLKNEGII AIKLAGGDEL IAVRHASDED
EVVFVTRDGK GLRFRQGDVR PMGRATAGVK GITLKGDDAL LSMDVVSDEA ADLFMVTEKG
FGKRTAISEF RPQGRGGQGV IAMKVNGERG KIAGVQVVRP GLHELVIVSN MGTTIRIDSD
SVPRQGRAAQ GVRVMNLREG DSVSALAKVV SSRGEPGEPD ELALDGITEE EAERSATGSR
PAPAANGGRK RG