Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_0006 |
Symbol | |
ID | 4115665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | + |
Start bp | 6385 |
End bp | 8943 |
Gene Length | 2559 bp |
Protein Length | 852 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638034798 |
Product | DNA gyrase subunit A |
Protein accession | YP_642799 |
Protein GI | 108802862 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTTGACA CCTTCTCGGG CAACATCCAG CCGCACTCCA TAGAGGACGA GATCCGCTCG TCCTTCCTCT CCTACGCGAT GAGCGTGATC GTCTCGCGGG CGCTGCCGGA CGTGCGGGAC GGTCTCAAGC CGGTGCACCG GCGGGTGCTC TACGCGATGC ACGACCTGGG GCTGCAGCCC AACCGCCCCT ACCGCAAGAG CGCCACGGTC GTCGGCGAGG TGATCGGTAA GTACCACCCG CACGGGGACG CGGCGGTCTA CGACACGCTG GTGCGTCTGG CCCAGGACTT CTCCATGCGC CACCCCCTGG TGGACGGCCA GGGGAACTTC GGGAGCGTGG ACGGCGACCC GGCGGCGGCC ATGCGCTACA CCGAGGCGCG CCTCACCAGG ATCGCCACCG AGATGCTGCG GGACATAAAC GCCGACACGG TCAACTTCGT CCCCAACTTC GACGAGAGCC AGCGGGAGCC GGAGGTGCTG CCCGCCCGGT TCCCGAACCT GCTCGTCAAC GGGGCCGACG GGATCGCGGT CGGGATGGCG ACCAAGATCC CGCCGCACAA CCTGGGCGAG GTGATCGACG CCACGGTGGC GCTCATCGAG GATCCGGAGC TCGACGACGA GGGCCTGGCG CGCTACATAA AGGGCCCGGA CTTCCCGACC GGTGGCATAG TGGTGGGCAC CCGCGGCATA CGGGAGGCCA TCCGCACGGG CCGGGGCTCG GTGCGGGTGC GGGCCAAGGC ACACACCGAG CAGATAAAGG GCAACCGGAC CCAGATAGTC GTCACCGAGC TGCCCTACCA GGTGAACAAG GCGCAGCTCC TGCAGAAGAT CGCGGAGCTT GTCAAGGACC GGAAGATCTC CGACATCGCC GACCTGCGGG ACGAGTCCGA CCGCGGCGGG ATGCGGATCG TGATCGAGCT CAAGAGAGAG GCCGTCCCCA AGGTGGTGCT GAACAACCTG TTCAAGCACA CCCAGATGCA GCAGAGCTTC GGGGTGAACC TGGTGGCGCT GGTGGACGGG GTGCCGAAGA CCCTCTCCTA CAAGGAGGCC CTCCGGCACT ACATCGCCCA CCAGTTCGAG GTCGTGACCC GCAGGACGCG CCACGAGCTG GGGCGCGCCC GCGCGCGGGC GCACATCCTG GAGGGGCTGC TCATCGCGCT CTCCAACCTG GACGAGGTGG TCGAGACCAT CCGGCGCTCG CGCAACGTGG AGACCGCGCG CAGGAACCTG GTGAAGCGGT TCAGGCTCTC GGAGCGCCAG GCGCAGGCCA TCCTGGACCT CAGGCTGCAG CGGCTGACCG CCCTCGAGCG GCGCAAGGTG GAGCAGGACC ACCGCGACCT CGTGGAGAAG ATCGAGTACC TGGAGGGCGT GCTCGCCGAC GAGTCGAAGG TCTACGGGAT CATCAGGGAG GAACTGCTCG AGATAAAGGC CGCCTACGCC GACGAGCGCA GGACGGCCAT CACCGCCCAG GAGGGGGCGG AGTTCGAGGT GGAGGACCTC ATCGCCGAGG AGGAGATGGT GATCTCCATC TCCCACGAGG GGTATCTCAA GAGCGTGCCC ATAGGCTCCT TCCGCAAGCA GGGCCGGGGC GGCGTGGGGG TCGCCGGGAT GGAGCTGAAG GAGGGCGACT ACATCGAGCA CCTCTTCATC ACCACCACCC ACCACTACAT GCTCTTCTTC ACCAACAGGG GCAAGGTCTA CCGCCTGAAG GTCCACCAGC TGCCGCGGAT GGGCCGGGCG GCCAAGGGCC GCCACGTCGC CAACCTGCTG CCGCTCGCCC CGGGCGAGCG GATAGCCGCC GTGATCTCCA CGCGCGACTT CGACGAGGCC GAGTACCTGC TCTTCGCCAC CCGGCGGGGC ATGGTCAAGA AGACCCCCTT CCGCGACTAC AACACCCCGC TCAAGAACGA GGGGATTATC GCCATAAAGC TCGCCGGCGG GGACGAGCTC ATCGCCGTCC GCCACGCCTC TGACGAGGAC GAGGTCGTCT TCGTCACCCG GGACGGCAAG GGGCTCCGCT TCCGGCAGGG CGACGTGCGC CCCATGGGCC GGGCCACCGC CGGGGTCAAG GGGATCACGC TCAAGGGCGA CGACGCCCTG CTCTCCATGG ACGTGGTCTC CGACGAGGCC GCCGACCTCT TCATGGTCAC CGAGAAGGGC TTCGGCAAGC GCACCGCCAT CTCCGAGTTC CGGCCCCAGG GGCGCGGGGG GCAGGGCGTG ATCGCCATGA AGGTCAACGG CGAGCGGGGC AAGATCGCCG GCGTCCAGGT GGTCCGCCCC GGGTTGCACG AGCTCGTGAT AGTCTCCAAT ATGGGGACCA CCATCAGGAT AGACAGCGAC TCGGTCCCCC GGCAGGGGCG CGCCGCGCAG GGGGTGCGGG TGATGAACCT GCGCGAGGGC GACTCGGTGA GCGCCCTCGC CAAGGTGGTC TCCTCCCGCG GCGAGCCGGG GGAGCCGGAC GAGCTGGCGC TCGATGGTAT AACGGAGGAG GAAGCGGAAC GTTCCGCGAC CGGGAGCCGC CCCGCGCCGG CCGCGAACGG CGGGAGGAAG CGTGGATAA
|
Protein sequence | MLDTFSGNIQ PHSIEDEIRS SFLSYAMSVI VSRALPDVRD GLKPVHRRVL YAMHDLGLQP NRPYRKSATV VGEVIGKYHP HGDAAVYDTL VRLAQDFSMR HPLVDGQGNF GSVDGDPAAA MRYTEARLTR IATEMLRDIN ADTVNFVPNF DESQREPEVL PARFPNLLVN GADGIAVGMA TKIPPHNLGE VIDATVALIE DPELDDEGLA RYIKGPDFPT GGIVVGTRGI REAIRTGRGS VRVRAKAHTE QIKGNRTQIV VTELPYQVNK AQLLQKIAEL VKDRKISDIA DLRDESDRGG MRIVIELKRE AVPKVVLNNL FKHTQMQQSF GVNLVALVDG VPKTLSYKEA LRHYIAHQFE VVTRRTRHEL GRARARAHIL EGLLIALSNL DEVVETIRRS RNVETARRNL VKRFRLSERQ AQAILDLRLQ RLTALERRKV EQDHRDLVEK IEYLEGVLAD ESKVYGIIRE ELLEIKAAYA DERRTAITAQ EGAEFEVEDL IAEEEMVISI SHEGYLKSVP IGSFRKQGRG GVGVAGMELK EGDYIEHLFI TTTHHYMLFF TNRGKVYRLK VHQLPRMGRA AKGRHVANLL PLAPGERIAA VISTRDFDEA EYLLFATRRG MVKKTPFRDY NTPLKNEGII AIKLAGGDEL IAVRHASDED EVVFVTRDGK GLRFRQGDVR PMGRATAGVK GITLKGDDAL LSMDVVSDEA ADLFMVTEKG FGKRTAISEF RPQGRGGQGV IAMKVNGERG KIAGVQVVRP GLHELVIVSN MGTTIRIDSD SVPRQGRAAQ GVRVMNLREG DSVSALAKVV SSRGEPGEPD ELALDGITEE EAERSATGSR PAPAANGGRK RG
|
| |