Gene Mmcs_5628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_5628 
Symbol 
ID4114496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008147 
Strand
Start bp201611 
End bp202825 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content72% 
IMG OID638034783 
Producthypothetical protein 
Protein accessionYP_642784 
Protein GI108802588 
COG category[L] Replication, recombination and repair 
COG ID[COG1112] Superfamily I DNA and RNA helicases and helicase subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value0.431962 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.25929 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGAGG ACTGGCCGGG CCGTGACCTG CTGGACACGC CGATGCTGGC GCGGGTGCTG 
CTGGCCGCGT GGGGCGGCGA TGCGGCGATC TGCGTTCCCG CTTGTCCCGG TGCGGGTAAG
AGCCGCCTGG TGGCGCTACT GGCCGGTGCG CTGGCGCATC GGGTGGGACT GCGGGTGGCA
GTGGCCGCGC AGACCCGCGA GCAAGCTGCC GAGCTGTCCC GGCGCATCGC CGCTGTCAGC
GACCGTTCCT CACTGATCGT GTCGGGGGCT GGTAAGAAGC CGGTCACCGT GGACGGCATT
CGCACCGTGG CGGGCCGCAG CGTGCGATGG CAGCACTCGA CCGGAGGGGA AATCCTGATC
GGGACCGCCG CGCGCTGGCT CTACGTCGAT CCCAACCTGG CCGGGGCCGA CGTTCTGCTG
GTCGATGAGG CGTGGCAATG CACCTACGCC GACCTTGGCG CCCTCGGTGC GCTGGCTCGC
CAGGTGGTCT GCGTCGGTGA CCCCGGCCAG GTGTCTCCGG TGGTGACCGG CTCGACCGAG
AAGTGGGACG GCCAGGCCAC CGGGCCGCAC CAGCCTGCCC CGGCTGCGCT GCTGGCCGCG
CACGGCGGCG ATGCCATCAC CGTCCACGAA CTGACGAACT CCTGGCGACT CGGACCGCAG
ACCTGCGCTC TGGTGTCGGC GCACTTCTAC CCGCAGATGC CGTTCACGTC ACGCCGCCCC
GACGAGTCCG TGATCGCACC GGACGGCACG GTGCTGCCCG AAATCGTCAA CCGCCCCACC
GAAGCGCGCA ACGGGCCGAC TGATCCGGCG CTGCTGACCG CGCTGGCCGA GCGGGTGCGC
GAACTGACTT GGCACGACTA CCGGCGCGGC GGTGTGCGTG AGGCGTTGAC CGCCCGCGAC
ATAGCCGTGG TCGTGCCGCA CGTCGCCCAA GCCGGTGCCG TGCGGGCGCT GCTGGCCGAT
ATGCCCGACG TACTGATCGG CACCGTCAAC GCACTGCAAG GCTTGGAACG ACCCGCCGTC
GTGGCCCTGC ACCCGATGGC CGGGTACCGC AGCACCGAGT CATTCGCCCT CGACGCGGGC
CGCATGTGCG TGACGCTGAG TCGGCACCGC GCGCACCTGA CGATCCTCAC CGATTCGGCG
ACCGCGCCGC TGCTGGACGC TGCCGCCGAC GACCCGCAGG CCGTGCACGC ACGGGCGGTG
CTGGCCGCGC TCTGA
 
Protein sequence
MVEDWPGRDL LDTPMLARVL LAAWGGDAAI CVPACPGAGK SRLVALLAGA LAHRVGLRVA 
VAAQTREQAA ELSRRIAAVS DRSSLIVSGA GKKPVTVDGI RTVAGRSVRW QHSTGGEILI
GTAARWLYVD PNLAGADVLL VDEAWQCTYA DLGALGALAR QVVCVGDPGQ VSPVVTGSTE
KWDGQATGPH QPAPAALLAA HGGDAITVHE LTNSWRLGPQ TCALVSAHFY PQMPFTSRRP
DESVIAPDGT VLPEIVNRPT EARNGPTDPA LLTALAERVR ELTWHDYRRG GVREALTARD
IAVVVPHVAQ AGAVRALLAD MPDVLIGTVN ALQGLERPAV VALHPMAGYR STESFALDAG
RMCVTLSRHR AHLTILTDSA TAPLLDAAAD DPQAVHARAV LAAL