Gene Mmcs_5582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_5582 
Symbol 
ID4114450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008147 
Strand
Start bp161878 
End bp162792 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content66% 
IMG OID638034737 
Productintegrase catalytic subunit 
Protein accessionYP_642738 
Protein GI108802542 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value0.0423164 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCACCG AGCACGCCGT GCCGATCGCC CCGCGGACAT TTCATGCCTG GGCGGTGCGG 
GCGCCCTCGA AACGGGCCCT GTGGGACGCC ACGATCACCG AGATCCTAGC CGGCTACTAC
GAGCCTGATG AGCACGGACG CCGCAGGCCC GAGTCGCTGT ACGGGTCGCT GAAGATGTGG
GCCCATCTGC AGCGTGAGGG CATCCCGGTG GCCAAGTCCA CCGTGGAACG CCTGATGCGC
AAGAACGGCT GGCAAGGCGT GCGCCGCCAG AAGAGGGTCC GCACCACGAT CCCCGACCCG
GAGGCGGTGC GACCGCCGGA CCTGGTGGAC CGCCAATTCG GGGTGGCCGC ACCCAACGTG
CTGCTCGTGG CCGACTTCAC CTACGTCAAG CTCGTCACCG GCGTGTTCGT CTACGTCGCG
TTCGTCATCG ACGCCTACGC CGGGTCGATC GTGGGCTGGG AAGCCTCGGC GTCCAAGCAC
ACCCGCTTCG TCGAATCCGC GCTGCGTCAG GCCGCTGCAC TGCGTGCCCG CCAAGGCCAT
CCCGTCGACG GCGCAATCCA TCACAGCGAC GCCGGCTCGC AGTACACGAG TGTGAGATTT
GGTGAGACAC TGAGCCTTTC GGGAATTCGC CCGTCCGTGG GCAGTGTTGG GGATGCCTTC
GACAACGCGC TGGCTGAGAC GACCATCGGC CTGTACAAGA ACGAATGTGT CCGGGCGGAT
TCCCCGTTTC GCCGCGGCCC ACTGAACACC GTGGGCGACG TCGAATACAT CACCGCCGAC
TACGTCGCCT GGTACAACCA GCAGCGCCTG ATGCACCGAC TCGGACGCAT TCCGCCGGCC
GAAGCCGAAG CCCGCTACTA TTCCCAACTC GTGACCGGTA GACCGGCCGG ATCACAGAAA
CCTGAGGGTG CATGA
 
Protein sequence
MLTEHAVPIA PRTFHAWAVR APSKRALWDA TITEILAGYY EPDEHGRRRP ESLYGSLKMW 
AHLQREGIPV AKSTVERLMR KNGWQGVRRQ KRVRTTIPDP EAVRPPDLVD RQFGVAAPNV
LLVADFTYVK LVTGVFVYVA FVIDAYAGSI VGWEASASKH TRFVESALRQ AAALRARQGH
PVDGAIHHSD AGSQYTSVRF GETLSLSGIR PSVGSVGDAF DNALAETTIG LYKNECVRAD
SPFRRGPLNT VGDVEYITAD YVAWYNQQRL MHRLGRIPPA EAEARYYSQL VTGRPAGSQK
PEGA