Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_5578 |
Symbol | |
ID | 4114446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008147 |
Strand | + |
Start bp | 157512 |
End bp | 159677 |
Gene Length | 2166 bp |
Protein Length | 721 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638034733 |
Product | phage integrase |
Protein accession | YP_642734 |
Protein GI | 108802538 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGGTG TTCGCAACGA ATTCCGAAGC GACGTACTGG AGTTCGATGC TGAGGATCCG GTGTTCGGTG GCGGATCGTG TCTCGTGGAT GGCTGCGAGC GAAGCGCCCG CGGCCGCGGT TTGTGTCCGG GCCATCACCA GCGGTGGTCC AACGCCGGCC GCCCTGCCCT GGACGAGTTC GCCGCCTCGA CAGATCACCG GTGGCGCAAA CAGCGGCCCA ACCAGTGCTG CCGGGCCCGT GCCTGCGGCT ACGGCTCCGC CCGTGGAGGG CTATGTCAGC TGCACGCTCA ACGGTGGGAA CGAGCCGGAC GTCCCGACCT CGATCAGTGG TGCGAGGACC CGCCGCCGAT CAAGAAGCCA GTTCCGGATG CACGCTGCCG AATCGAGCAC TGCTCGTTGT GGCCTCAAGC CCAACTGGCG TTCTGCCACA CCCACGCCAA TACCTGGAAG GCCAACGGCC GCCCCGACAT CGAGGAGTTC GCATCCCGGT TCGCCTCGAC CGAGATACCA CCCAACGAGA CAATCGTGCT GGGTAGCTTG ACACCGCAGC TGAAGTTGGA GATGCAGTAT GTGCTGCAGT TTCGCCACGA CGAGCGTCGG GGCAAACTCA CCCCGACGAT CGTCGCGCGA GTGGTGCGAC TGCTGGCTCA GGCCGGGGTC GCGTCCCTGC TCGAGCACGA CGAAGACGCC TGGCGCGAAC ACTCCGCATC GCTGCGAACC GACACCCGCT CGCGGGGACT ACTCATCTAC GCCTACCGCA CGGTCGTGGA CCTGGCCGAA GCCGGTGGCT GGGAGGCCGA ATATCGCCGC GACGTCTGGA GAATGCACCG CCTCGGCTTC GAAGGTCGAT ACACCCTGCA GTTCAACCGC ATCCCGCAAC CTTGGCTGCG GGAACCTGCC AAACGCTGGA TCCGACTGCG CCTCTCACGC GGCCTTGGCC TGGAAGCCGG CGGCGGGCGC CCGGTGCTGG CCATCGCCAG ATTCGCCCAA TTCCTCGCCG CAGCCGGTAT CGATCGAATC GAGCTAATCG ATCGCGCGCT GCTGGAACGC TACCTCGCCG ACCTGCACCG GGAATTGCGC CCGCAGCACC AAGGCAGCCA CACCGGGCTG CTCAACGGGT TCTTCGCCGC CATCCGCCAA CACCGTTGGA GCCCTGACCT TCCCGCGACA GCGATGTTCT TCACCGAGGA CTATCCCCAG CGCGGCGAAC ACCTACCCAA GGCGTTGGCT GAACACGTCA TGACTCAGCT TGAACATCCC GACAACCTCG ACCGCTGGGA TAACCCCACC TACCGGTTGA TCACCATCAT CCTGATGCGC TGCGGACTGC GGATCACCGA CGCCCTGCGG CTGCGCGGTG ACTGCATCAC CACCGACGCC GACGGCGCGC CCTACCTGCG CTACTTCAAC CACAAGATGA AACGCGACGC CCTGGTGCCC ATCGACCCCG ATCTCGCCGA CCTCATCGGC GCTCAGCGTG ACCGCACCAG CCAACGCTGG CCAGACGGCA CCCCGCTGCT GTTCCCGCGC CCCACCAAGA ACCTCAACGG TCAACTCCCA CTGGCAATCC CGACCTACCG GGAAGCGCTA GGCCGCTGGC TGCACGCATG CGACATATGC GACGAACACG GCCACCAAGT GCGAGTCACT CCGCACCAAT GGCGACACAC CCTGGGCACC CGCCTGATCA ACCGCGACGT TCCCCAAGAG GTCGTGCGCC GAATCCTTGA CCACGACTCA CCGCAGATGA CCGCGCACTA CGCCCGCCTG CACGACACCA CCGTGCGTCG CGCCTGGGAA GCCGCACGCA AAGTCGACAT CCACGGCCAC ACCGTCGCCC TTGACCCCGA CGGGCCACTC GCCGAAGCCG CCTGGGCCAA ACAACGCCTC GGCCGCGCCA CCCAGGCCCT GCCCAACGGC TACTGCGGCC TGCCCGTCCA ACAGAGCTGC CCCCACGCCA ACGCCTGCCT GACCTGCCCT ATGTTCCTGA CCACCCCCGA ATTCTTGCCG CACCATCGAG CTCAACGCCA CCAGACCCTC GAGCTGATCA CCACCGCCGA AGCCCGCGGC CAGAACCGCC TCGCCGAAAT GAACCGACAG GTGCTCGGAA ACCTCGACAC CATCATCGCC TCCCTCGACA CCGAAGCTCC CGCACATGAA GGCTGA
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Protein sequence | MAGVRNEFRS DVLEFDAEDP VFGGGSCLVD GCERSARGRG LCPGHHQRWS NAGRPALDEF AASTDHRWRK QRPNQCCRAR ACGYGSARGG LCQLHAQRWE RAGRPDLDQW CEDPPPIKKP VPDARCRIEH CSLWPQAQLA FCHTHANTWK ANGRPDIEEF ASRFASTEIP PNETIVLGSL TPQLKLEMQY VLQFRHDERR GKLTPTIVAR VVRLLAQAGV ASLLEHDEDA WREHSASLRT DTRSRGLLIY AYRTVVDLAE AGGWEAEYRR DVWRMHRLGF EGRYTLQFNR IPQPWLREPA KRWIRLRLSR GLGLEAGGGR PVLAIARFAQ FLAAAGIDRI ELIDRALLER YLADLHRELR PQHQGSHTGL LNGFFAAIRQ HRWSPDLPAT AMFFTEDYPQ RGEHLPKALA EHVMTQLEHP DNLDRWDNPT YRLITIILMR CGLRITDALR LRGDCITTDA DGAPYLRYFN HKMKRDALVP IDPDLADLIG AQRDRTSQRW PDGTPLLFPR PTKNLNGQLP LAIPTYREAL GRWLHACDIC DEHGHQVRVT PHQWRHTLGT RLINRDVPQE VVRRILDHDS PQMTAHYARL HDTTVRRAWE AARKVDIHGH TVALDPDGPL AEAAWAKQRL GRATQALPNG YCGLPVQQSC PHANACLTCP MFLTTPEFLP HHRAQRHQTL ELITTAEARG QNRLAEMNRQ VLGNLDTIIA SLDTEAPAHE G
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