| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_5559 |
|---|
| Symbol | |
|---|
| ID | 4114427 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008147 |
|---|
| Strand | + |
|---|
| Start bp | 135255 |
|---|
| End bp | 136613 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638034714 |
|---|
| Product | PPE protein |
|---|
| Protein accession | YP_642715 |
|---|
| Protein GI | 108802519 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG5651] PPE-repeat proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 52 |
|---|
| Plasmid unclonability p-value | 0.67535 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTCG TCGCACCACC GGTCTGGCAC GCAGCGCCGC CGGAAGTGCA TTCGACGTTG
CTCAATGTCG GCGGCACACC GGCGGGCATC ACCGCCGCCG GTGCGTCGTG GGCTCAGCTC
GCCGCCCAGT ACATCGCTGG CATCGCTGAA CTCGAAGGCA TATTGGCGTC GGTTCAGGCG
AATTACCAGG GGCCGTCGGC CGAACAGTTC GTCGCCACGC ACCTCCCGAT GCTGGCCTGG
ATGACCGAAG TCGTCGCGAA AGCTACCGTG GCGGCCGCCG CGCACGCCGA GGTGGTCGCC
TCCTACGAGA CGGCTGTGAT CACCATGCCG ACCATGGCCG AACTGATCAA CAACCATGTC
GTGCACGGCA TCCTGGTAAC CACCAACTTC TTTGGCGTCA ACACCATCCC CATCGGGCTG
AACGAGGCCG ACTACGTGCG GATGTGGAAT CAGGCCGGCG ACGTCATGGC CGGCTGGGAC
GGCGCCTCCA CCGGGGCGGC CGACACCATC ATGGAAACCC CACCATCGCC GTTCACCCTG
ATCCCCGGCG TCGGCGAATC CGGCAGCGCC GCGGCCACCG CCGCATCTTT CGGCACGCAG
ATGCAGGCTC AGGCCGGCGG GATGGCGCTC AACGGTGCCG ACTTGATGGG CAGCAAGCTG
CTGGCCGGCA AGGCCGCCAC CAGTCCGGCG TCGGTGGCCA ACAAGATGCC CGGCTCGTTC
GGTGACGAGG CCCAGAACGC GGCCAACCAG AGCGACGATC CCGCCAAACA AGCGCTCAAC
CCCGAGAACA TGGGCCAGAG CATGATGCAG CAGGTGTCGT CGATGGCGTC GAGCGCACCT
CAGGCCGCCA CCTCCGCCAT CCAGGGGCCT GCCCAGATGC TCACCCAGGC GCCGCAGATG
CTTGCTCAGG CGCCCCAACA GCTCAGCAGC ATGCTCTCGC AGTTCGCCGG CGGCTTCGGC
TCCGACCTGG CCTCACAGAC CGGCACGGGC GGTGCCGGCC CGGTCGGGTT CGCCGGCACC
GGTGCGATCA AGGGCTTCAA CCCTGCCGGG GTGACCAGCC TGGCAGGCGG CGCCTTGGGC
ACCGGTCCCT CCAAGCCCCT CATGCCGTCG ACGTGGGGTG CCGCGCCGAC CACGGCAGCT
GACTCGTTGG CCAACAGCGC CCGCGGCCTG GCGCCGGTTG GTGCCGGACT CCCCGGAGCC
GGGGCCAGCG GCAGCGGCGC CGGCGGCGGA ATGATGGGCC ACGGCGCGAA CAGCCGGCGC
TCCGGGCGCG CCCAGCAGGT CAACACCTAT ACCGATGACG CTGTCGACGA AGACGCCGAC
GCCGACAGTG ATGGGGGGAC GTTCGCGATG ACCCGCTGA
|
|---|
| Protein sequence | MALVAPPVWH AAPPEVHSTL LNVGGTPAGI TAAGASWAQL AAQYIAGIAE LEGILASVQA
NYQGPSAEQF VATHLPMLAW MTEVVAKATV AAAAHAEVVA SYETAVITMP TMAELINNHV
VHGILVTTNF FGVNTIPIGL NEADYVRMWN QAGDVMAGWD GASTGAADTI METPPSPFTL
IPGVGESGSA AATAASFGTQ MQAQAGGMAL NGADLMGSKL LAGKAATSPA SVANKMPGSF
GDEAQNAANQ SDDPAKQALN PENMGQSMMQ QVSSMASSAP QAATSAIQGP AQMLTQAPQM
LAQAPQQLSS MLSQFAGGFG SDLASQTGTG GAGPVGFAGT GAIKGFNPAG VTSLAGGALG
TGPSKPLMPS TWGAAPTTAA DSLANSARGL APVGAGLPGA GASGSGAGGG MMGHGANSRR
SGRAQQVNTY TDDAVDEDAD ADSDGGTFAM TR
|
|---|
| |