| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_5550 |
|---|
| Symbol | |
|---|
| ID | 4114418 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008147 |
|---|
| Strand | + |
|---|
| Start bp | 121644 |
|---|
| End bp | 123587 |
|---|
| Gene Length | 1944 bp |
|---|
| Protein Length | 647 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638034705 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_642706 |
|---|
| Protein GI | 108802510 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.429574 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTCCA CCGCGGTCAG CACCGCCCCG GTCACCTCCT GGTGGTACGG GCAAGGACGC
GCGGTCGACG TCGTGCGGCG CCTGGAATCG CTGTACACGC TCTCCCCGCC CCCCACCGCC
CCCGCCGGGC TGGTCACCGC CCGCCGAGAC GAACTGACCG TCACCTTCGT CGCCGGCCTG
AAATCCCCAC TGCCGCACCC ATGGCGGCCC GCCGACTCCA GCAACGAGGC ACGGATCCCC
TGGGAGGCCG TGGATCCGGG AAACGACCCC GACCCGGACC GGCCGGTGTA CCTGGTGGTG
TTCGGCACCA CCGACGATGG CGGACTGATC GGACTGAATC TGGCGGCCTT TCAACGGATC
CGCTTCGACG GTGACACCGC CACCGCCACC GCCCTGGTCA GCCGGTGGGT GCTGGAGCTG
GTGTCCACCC ACCCCGACAT CACCATCGGT GTCACCGCCG ACGTATGGAA CGGCCCCTTC
ACCACGCGGG TCCAGCCCGT GGCCGCGGGC CGGGTCCCGC AGGTCGACGT CCTGGTGTGC
GGACCCGCCC TGACGTACAC CGACCGGTCG CAGATCGTGT CCAGTGCCGC CAGCAAAATT
GTCATCGACC TGGGCAAAGA CGCCGCCGTA GATGCCCGCT GGACCATCAC CTGCGGCCCG
GACCGGCTCG GGCAGATCAG CAGCGAACGA TCGGCCAGGC CGATGACAGC GACGCTGATC
GTGCCCAGCG CCGCCACCGT GGACCGCTGC GCAGCGCTGC TGACCGACAC CTCAGCCCAG
GCCGCGGCCA CTCCGCCCGA TCCCACTTAC AGCGCGGCGG CCCCCGAAGC CCCCATCACC
GAGCTGCCGA CGGCCGACCT CGACGACCTC GACGACCCCG CCACCGACCC TCATCTGCCG
ATCCCGTCCG ACGTCGCGAC ACTGCACGAC GACGGAATCG ACTTCTTCGC AACACAACCC
GCCGCGGCGC CCAACGTCGG ACCCACACCG CAGCTGCAAC CCGCCCACAA CGACCCCACC
GACGCGGACC AGGAACGCGA CTGGCCCACC GACGACCTGG ACGGGTCGAC AGCTGCGGCC
GATGTGGGAC GCGCTGAGCT CAACCCCGCG ATCGGAGAGG GCAGCACACC GGCGGCCGAC
GCCACCGCAG AACCTGAACC GGCAGCCGCG CCGGCAACAG CGGCCCCAAA ATCACTCCCC
AGCGACACCG CCGACGGCGC CGCCCCCGTG GTCGCAACCA TCTGGAACAG GATCCTCGGC
CAAGTCGCCC TCGACCCCCC GCACGCCACC CAGCAGCCGG GCCCGCGAGA GAAACGACTC
AACGAGCTGA CGGTGTTCCT GCAACACAAC CCGTGGGTGA GCGCCACCGA CATCGTGCGC
CACATCTACG GCGGTGTGGC CGCGGACAAG ACGGTGACCC AACAAGTTTC GCTGCTGCGC
GCACGGCTCG GCGCCGTCTT CGCCGGCGGC CCCAAAGCGC TGCCACCCAT GACCGAGGGC
GGCTACCACC TCGACAACGC CGTGCGCTCG GACTGGATGG AGTTCGAGCG CCTTGTCGAG
ATCCTGCCCG AGACCACGCC CACGCCGAAC CTCGTCGCCG CCATGGATCT GGTCACCGGC
CCACCACTGG GGGGCATCGC GCCCAAGGAA TGGACCTGGA CCAAGGATCT GCGTGACGAG
CTGCGTGATC GCGTCGCCGG CGCCGCTGTT GTCCTGGCGC GCCGCCACCA TTCGGCGAAG
GCCTACAGCG CTGCCGTCGA GACCGCTCGC AAGGGCCTGT GGTACGACAA CGCCCGCCAG
GATCTGTGGC AGATCGGTAT GCAAGCGGCC CTGGATGGGC ACGACAAAGA CGCCTACAAG
ACCCTGCGCA CCCAATACCT AGCCGCAGTT CCCGGATCTG AACGGGACCC CGAAGTATTC
GATCTGACGA AACGAGCAGG GTAG
|
|---|
| Protein sequence | MTSTAVSTAP VTSWWYGQGR AVDVVRRLES LYTLSPPPTA PAGLVTARRD ELTVTFVAGL
KSPLPHPWRP ADSSNEARIP WEAVDPGNDP DPDRPVYLVV FGTTDDGGLI GLNLAAFQRI
RFDGDTATAT ALVSRWVLEL VSTHPDITIG VTADVWNGPF TTRVQPVAAG RVPQVDVLVC
GPALTYTDRS QIVSSAASKI VIDLGKDAAV DARWTITCGP DRLGQISSER SARPMTATLI
VPSAATVDRC AALLTDTSAQ AAATPPDPTY SAAAPEAPIT ELPTADLDDL DDPATDPHLP
IPSDVATLHD DGIDFFATQP AAAPNVGPTP QLQPAHNDPT DADQERDWPT DDLDGSTAAA
DVGRAELNPA IGEGSTPAAD ATAEPEPAAA PATAAPKSLP SDTADGAAPV VATIWNRILG
QVALDPPHAT QQPGPREKRL NELTVFLQHN PWVSATDIVR HIYGGVAADK TVTQQVSLLR
ARLGAVFAGG PKALPPMTEG GYHLDNAVRS DWMEFERLVE ILPETTPTPN LVAAMDLVTG
PPLGGIAPKE WTWTKDLRDE LRDRVAGAAV VLARRHHSAK AYSAAVETAR KGLWYDNARQ
DLWQIGMQAA LDGHDKDAYK TLRTQYLAAV PGSERDPEVF DLTKRAG
|
|---|
| |