Gene Mmcs_5535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_5535 
Symbol 
ID4114403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008147 
Strand
Start bp105085 
End bp106458 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content69% 
IMG OID638034690 
Producthypothetical protein 
Protein accessionYP_642691 
Protein GI108802495 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.439091 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGC GCCGTCTCAC CCTGCGGCTG GCCACGCTGG CAGCCTGTCT GTCGGTCAGC 
ATGGCGGAGC TGCTGAGCGC CGCGCCGAGC GCCGTGGCCG CCGCGGGCTG CCCCGCAGTC
GAAGCCATCG CCGTTCCCGG CACCACACAG ACCAATCCGC AGGCCGATCC CGCCAAGCCG
GTAGGTGTGC TGGGGACCAT CCTGGAACCA CTCCGAAAGA ACGCCCCCGT CAAGCTCGTC
ACCTACTACA CGCCTTACCC GGCCACCATC GTCGGCGGCA CCGAAGGTGG CGGCTACCGA
GCGTCCAAGA ACGCCGGGAT CGACGCCACC AACGCCCGCC TCAAGGCCGT CGCCGACCGC
TGCCCCAGGA CCGTGTTCAT CCTCACCGGC TACAGCCAGG GCGCCGACGT CGCCGGTGAC
GTTGCCGCCT CTATCGGCCA CAACCGCGGT GTCATCCCCG CCAACCGCCT CCTGGGCGTC
GCCCTGGTCG CCGACCCCTC ACAAGCGCCG GTCGGACAGC CCACCATCGG GCTCACCCAG
CCCGGCATGG GCTTCGCCGG CGTCCGCTCC GGCGGGTTCG GCTCCCTGAC CCAACGCAAC
GGCCTGTTGT CGCTGTGCTC GCCCCGCGAC TACTACTGCA ACCTGCCCCA GGGCGACCTC
GTGATGCGCT TCATCGGCCA TCTGGGCTCC CACCTCGACG CCTCCGACCC CGCCGGATCG
GCGCAGAAGC TCGCCACCAT CTTCATGGCC GGCCTCGTCG CGCCGGCCAC CGCCGCGATC
AACCAGATCT TGGCGTTGGT CAACGACCCG AACCTGATCC CGAACCTGAT CCAGCGCGGC
GTCGCCTTCG CCAAGGCACT GACCCAACAG CTGTTCTGGC TGGCCGGCCC CCAGGTCGCC
GCCGTCGCCA CCGAGCTGGT CAACGCCGTC ACCTACGTCA TCAACCTAGT CACGTCGCGC
TCCTGGGCGG CAATCCCCGC GGCGATCGCC ACCATCGCCA CCCGAGCCAC CGCCGTCGGC
ACTGCCCTGT CCCAGATGAA AGACAAGACC GCCACCATCA ACGTCAGCGG CTTCGGACCG
GTCGGAGCCG GCCTCAACCA GCCCGGGGTC AACCCCGGCG ACCTGGCCAC CGCAGTGCTC
AACGCCATCA GCGTGGCCAC CGGCGGCGTC GGCACCACCT CCACCGGCAT GTTCGGCCCC
ACCTTCTCGC AGTTCTCGCT GGCCTCGGTC GCCACCTCGA TCAAGCACTA CGCCGAGTTC
ATCAGGGGCG GCTTCCATGA GAACTACGAC ACCACCCGCC TCGACCGCGC CGGCCACACC
GGCACTCAGA TCGCCCAGCG CTACTTGGTC AACCAGATCA ACAAGCTCGT CTGA
 
Protein sequence
MTARRLTLRL ATLAACLSVS MAELLSAAPS AVAAAGCPAV EAIAVPGTTQ TNPQADPAKP 
VGVLGTILEP LRKNAPVKLV TYYTPYPATI VGGTEGGGYR ASKNAGIDAT NARLKAVADR
CPRTVFILTG YSQGADVAGD VAASIGHNRG VIPANRLLGV ALVADPSQAP VGQPTIGLTQ
PGMGFAGVRS GGFGSLTQRN GLLSLCSPRD YYCNLPQGDL VMRFIGHLGS HLDASDPAGS
AQKLATIFMA GLVAPATAAI NQILALVNDP NLIPNLIQRG VAFAKALTQQ LFWLAGPQVA
AVATELVNAV TYVINLVTSR SWAAIPAAIA TIATRATAVG TALSQMKDKT ATINVSGFGP
VGAGLNQPGV NPGDLATAVL NAISVATGGV GTTSTGMFGP TFSQFSLASV ATSIKHYAEF
IRGGFHENYD TTRLDRAGHT GTQIAQRYLV NQINKLV