| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_5505 |
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| Symbol | |
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| ID | 4114373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. MCS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008147 |
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| Strand | + |
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| Start bp | 79936 |
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| End bp | 81360 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638034660 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_642661 |
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| Protein GI | 108802465 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 0.334264 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCAAGC GTAAGGACGC GGAATCGGTT GGTAGGCGAC GGCAGTGGGC GGCTGACCGT
GCGTTGCGGC CTGCGATGCG CTCACCAGGG CGCCCGGACC CGTCGCGGTC GGTGCAGCGT
CAGTTTTGGC GGCTGATCGC CCAGGGTGTC TCCACCGACG ACGCAGCCGC AGAGGTCGGC
GTGTCGACAC CGGTGGCGAC CAGGTGGTTC CACCACGCTG GCGGCATGAC GCCGATCAGT
CTGGATGAGC CCACGGGCCG GTATCTGTCG TTCGCCGAGC GGGAGGAGAT CGCACTGCTA
CGCGCCCAGG GCGCCGGGGT GCGTGAGATC GCCCGCGAGA TCAAGCGTGA CCCCTCGACA
GTTTCGCGGG AACTGCGGCG CAACGCAGCC ACCCGCAGCG GCACGCAGGT GTACCGCGCA
GGGGTGGCGC AGTGGAAGGC CCAGCAAGCA GCAAAGCGCC CGAAACCCGC GAAACTGGCA
GTCAACCCGC AGCTGCGTGA GTACGTGCAG CAGCGGCTCG ATGGCAGTGT CCGCGGACCC
GACGGCACCG CCGTCGCAGG TCCGCAGACC AAGGCCTGGA ACGGCCGCAA CAAGCCGCAC
CGACAAGACC GACGGTGGTC GACAGCATGG AGCCCGGAAC AGATTGCCCA CCGCTTACCG
CTGGATTTCC CCGATGATGA GTCCATGCGC ATCAGCCATG AGGCGATCTA TCAGTCCTTG
TTCATCGAGG GGCGTGGGGC GCTCAAACGG GAATTGGTCG CGTGCCTGCG GACCGGTCGT
GCGCTGCGGG TCCCGCGGGC CAGGACACAG AACAAACCGC AGGGACATGT CACCGCGGAC
GTCGTGATCA GCAAACGCCC TGCCGAAGCC GCCGATCGCG CAGTTCCTGG GCATTGGGAG
GGTGATTTGA TCATCGGTGC GGGCCGGTCG GCGATTGCCA CCGTGGTGGA ACGCAAGAGC
CGCTCGGTGA TGCTGGTTCA CCTTCCCCGC CTCGAGGGGT GGGGTCTGGC GCCGCCGGTG
AAGAACGGGC CGGCGCTCAG CGGCTACGGC GCCGAGGCGA TGAACGCTGC CCTGATCGCC
TCACTGGCAC AGCTACCCAA GCAGCTGCGT CAGACGTTGA CATGGGACCG CGGCAAAGAG
TTGGCCGCGC ACGCCCAGTT CACCTTCGAC ACCGGAACGA AGGTGTTTTT CGCCGACCCG
CACTCGCCAT GGCAGCGGCC TACCAACGAG AACACCAATG GCGTTCTGCG TCAGTACTTT
CCGAAAGGCA CCGACTTATC TCGATGGTCG GCTCAAGACC TCGAAGCGGT CGCACTGACG
CTCAACAACC GACCCCGAAA GGTCCTCGGC TGGAAGACTC CCGCCGAAGT CTTTGCCCAA
CAGCTACACT CACTCCAACA ACCCGGTGTT GCAACGACCG ATTGA
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| Protein sequence | MAKRKDAESV GRRRQWAADR ALRPAMRSPG RPDPSRSVQR QFWRLIAQGV STDDAAAEVG
VSTPVATRWF HHAGGMTPIS LDEPTGRYLS FAEREEIALL RAQGAGVREI AREIKRDPST
VSRELRRNAA TRSGTQVYRA GVAQWKAQQA AKRPKPAKLA VNPQLREYVQ QRLDGSVRGP
DGTAVAGPQT KAWNGRNKPH RQDRRWSTAW SPEQIAHRLP LDFPDDESMR ISHEAIYQSL
FIEGRGALKR ELVACLRTGR ALRVPRARTQ NKPQGHVTAD VVISKRPAEA ADRAVPGHWE
GDLIIGAGRS AIATVVERKS RSVMLVHLPR LEGWGLAPPV KNGPALSGYG AEAMNAALIA
SLAQLPKQLR QTLTWDRGKE LAAHAQFTFD TGTKVFFADP HSPWQRPTNE NTNGVLRQYF
PKGTDLSRWS AQDLEAVALT LNNRPRKVLG WKTPAEVFAQ QLHSLQQPGV ATTD
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