Gene Mmcs_5440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_5440 
Symbol 
ID4114525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008147 
Strand
Start bp20985 
End bp21884 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content63% 
IMG OID638034595 
Productalpha/beta hydrolase fold 
Protein accessionYP_642596 
Protein GI108802400 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.341918 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTCCAAC ATGATTCAAT CTGGGTGAGC TTGCTTGGAG CGGAAACACG CTTCGTAGAT 
GTCGACGGCG TCCGTACCAG GACAATTCAG GCAGGGGAAG GTCCGGACCT CATTCTCCTG
CACGGGGGAG GCGGTCACGC CGAAGCCTTC GCCCGCAATG TGACGGCGCT GTCGCGTCAT
TTCCGAGTGC ATGCGCTGGA CCTGTTGGGT CACGGTCTCA CCCGTGGTTG TGAGGTCGCC
CCGAACCGTA AGGACTATGT CAGTCACCTA CTCGGATACA TGGACCAGGA AGGCATCGAC
CGAGCCCACC TGGTCGGCGA GTCGTTAGGA GGTTGGATCG CGGCGTGGAC TGCGTTGGAA
CATCCCGACC GTGTCGACCG GTTGATCTAC CTGTGCGGCG CGCGGTTGAC GCTAGAGGTC
GGCGCCGATG CCGAGGCTCG CACCGCTGCC GGGCGCGCAG AGCTTGCCCG GGTCACCCGG
CAATTCCTGG CTGACCCGAG TCCGGCGAAT GTGCGGGAGA GGATGGCGTG GCTTTTCCAC
CACCCTGACC GCGACCTGAC CGATGAACTG GTGGCGCTGC GGTGGGCGCT TTACCAGAGC
GAAGAATCGC GGTCGGCACT GACGAACGCG ACGGCGCCGC CCTCAGCGGC GACTGCTGAG
GACAATCTCA CGGCTGAGCG ATTGACCAGC TTGACCAGGC CCACGCTCGT GCTGTGGACG
AGTCACAATC CCTCGGCGAC GGTGGAATTC GGACGGCGGG CAGCCGAGCT AATTCCCGGC
GCTGAATTCG CATTGATGGA GGATTGTGGC CATTGGCCGC AGTGGGAACG GCCGGAAGAG
TTCAACCAAA TCCTCACCAA CTATCTTCAA GGTGATCGCG AGTCCCGAGG GCAACGTTGA
 
Protein sequence
MLQHDSIWVS LLGAETRFVD VDGVRTRTIQ AGEGPDLILL HGGGGHAEAF ARNVTALSRH 
FRVHALDLLG HGLTRGCEVA PNRKDYVSHL LGYMDQEGID RAHLVGESLG GWIAAWTALE
HPDRVDRLIY LCGARLTLEV GADAEARTAA GRAELARVTR QFLADPSPAN VRERMAWLFH
HPDRDLTDEL VALRWALYQS EESRSALTNA TAPPSAATAE DNLTAERLTS LTRPTLVLWT
SHNPSATVEF GRRAAELIPG AEFALMEDCG HWPQWERPEE FNQILTNYLQ GDRESRGQR