| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_5436 |
|---|
| Symbol | |
|---|
| ID | 4114521 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008147 |
|---|
| Strand | + |
|---|
| Start bp | 17428 |
|---|
| End bp | 18252 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638034591 |
|---|
| Product | 4-oxalocrotonate decarboxylase |
|---|
| Protein accession | YP_642592 |
|---|
| Protein GI | 108802396 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3971] 2-keto-4-pentenoate hydratase |
|---|
| TIGRFAM ID | [TIGR03220] 2-oxopent-4-enoate hydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 71 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.635895 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTTGTCA TGACATCGGT GTGTTCCCAG GCGATCAGCG AAGCGGCCGA TCGGCTCGCT
CAGGCATCGA AGACGGGCGA AACGTGTGCG CCAATTCGTG ATCTGATCGG ACGGGAGGAC
ATCGACGCCG CGTATCGGGT GCAGTCTCGC AACATTGAGG TACTGCTGGC GTCGGGAAGG
CGCATCATCG GACGCAAGAT TGGGTTAACG TCGCCGGCGG TGCAGCACCA ACTCGGGGTC
GATCAGCCCG ACTTTGGGGT GCTGCTCGAC GACATGGATT GTACGAACGA CACCGCGGTG
GACATCACGC GTTTGCTGCA ACCCAAGATC GAGGCCGAGA TCGCCTTCGT TCTTCGAGCC
GACATTGCCG AGCGGATCAC TGCTGAGCAG GCGCCGGAGT TCGTGGACGG GGTCTTCGCG
GCATTCGAGA TCGTCGACAG CAGAGTGGCG AACTGGGACA TCAGCCTCGC AGACACCGTC
GCTGACAATG CGTCGGCGGG ACTCTACGTG CTGGGGGAGC GAGTGGACCG AGTCGATGCT
CCCGACCTCG CCGAGGTCAC GATGACCGTT AGCGCAGACG GAGCAGAGGT CTCGCGAGGC
AAGGGGGCGG ACTGCCTGGG TAGTCCGTGG GAAGCATTGG CGTGGCTGGC GGCGACCAGC
TTGGAGTACG GGGCGCCGTT GCGGTCAGGC GACGTGATCC TCTCCGGTGC GCTCGGACCG
ATGGTTCCTG TCACTGCCGG ATCGACGTAT ACGGCAACGA TATCCGGAAT CGGCAGTGTC
ACTGCCAGAT TCACGACCAT TTCGAGCGAG GCCGGTAAGC CATGA
|
|---|
| Protein sequence | MVVMTSVCSQ AISEAADRLA QASKTGETCA PIRDLIGRED IDAAYRVQSR NIEVLLASGR
RIIGRKIGLT SPAVQHQLGV DQPDFGVLLD DMDCTNDTAV DITRLLQPKI EAEIAFVLRA
DIAERITAEQ APEFVDGVFA AFEIVDSRVA NWDISLADTV ADNASAGLYV LGERVDRVDA
PDLAEVTMTV SADGAEVSRG KGADCLGSPW EALAWLAATS LEYGAPLRSG DVILSGALGP
MVPVTAGSTY TATISGIGSV TARFTTISSE AGKP
|
|---|
| |