Gene Mmcs_5435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_5435 
Symbol 
ID4114520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008147 
Strand
Start bp16640 
End bp17389 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content64% 
IMG OID638034590 
ProductIclR family transcriptional regulator 
Protein accessionYP_642591 
Protein GI108802395 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones78 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.517409 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACGGG ATGGGTTGTT GTCGCAGCTG GAGAAGTCCG CGCTGGTGCT CGACGCATTC 
CCTGGCGGAT CCGCGCTGAC ATTGGCCCAA GTGTGCACCA GGACCGGACT TGCTCGCTCG
ACAGTCCACC GCCTCCTCGT TGACCTGGCC ACGCTTGGAT GGATCGGCCG CTCCGGCAAC
ACCTTCGAAC TCGGAATCGG CCTGTTCGAA CTCGGCGAAC GCGTCGCCGT GAAGCACCGT
CTGCGCACGG CGGCGATGCC GTTCATGCAA GACCTGTACG CCGTGACCGG CCAAACGGTG
CACCTGGCCG TGCGCAATCG ATTCGATGCG GTGTATATCG AGAAGCTGTC CGGCCACATT
CCGCTACCGC TGCCCTCACA GATCGGCGGA CGGCTCCCCC TTACCTGCAC TGCGGTGGGC
AAGGCGTTAC TCGCATCCGA GACCGCGGAG TTGCGCATCG AGGTCCTCGC CCAACCCTTG
CGTCGTTACA CCGTGAACTC CATCACCGAC CCCAAGAAAC TTGCCCGCGA ACTCGACGAC
ATTTGCCGTA CCGGAGTTGC GGTCGAACGC GAGGAATCTG CACTCGGCGG ATGCTGTGTC
GCCGTCCCAG TTCTGCTGGA CGGCCAGCCA ATCGCGGCCC TATCGGTGTC CGTTCCGACC
GAACAGTTCA GACCTGAACT CCTCGCCCCA GCCGTGCGCA CGGGAGCATT GGCCTTAGGG
CGCGTTCTCG CCAGAGCCGC AGCACCATGA
 
Protein sequence
MSRDGLLSQL EKSALVLDAF PGGSALTLAQ VCTRTGLARS TVHRLLVDLA TLGWIGRSGN 
TFELGIGLFE LGERVAVKHR LRTAAMPFMQ DLYAVTGQTV HLAVRNRFDA VYIEKLSGHI
PLPLPSQIGG RLPLTCTAVG KALLASETAE LRIEVLAQPL RRYTVNSITD PKKLARELDD
ICRTGVAVER EESALGGCCV AVPVLLDGQP IAALSVSVPT EQFRPELLAP AVRTGALALG
RVLARAAAP