| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_5433 |
|---|
| Symbol | |
|---|
| ID | 4114518 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008147 |
|---|
| Strand | - |
|---|
| Start bp | 14567 |
|---|
| End bp | 15886 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638034588 |
|---|
| Product | transposase, mutator type |
|---|
| Protein accession | YP_642589 |
|---|
| Protein GI | 108802393 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3328] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 68 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0965425 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCACCG TAGTTCACGA TGCCATCGAG GCCAACGAAA GCACTGGCGG TGCTGGTCGG
TCGTTGTTGG ACGAGATCGT CCGCGACGGC GCCCGTCAGA TGCTGGCCGC CGCGTTGCAG
GCTGAGGTCG CCGCCTACGT GGCCCAGTTC GCCGATCAGC TCGATGAGAA GGGGCATCGG
CTGGTGGTCC GCAACGGCTA TCACCAGGTC CGCGAGGTGC TGACGGCAGC CGGGGCAGTT
GAGGTGAAAG CACCGCGAGT CAACGACAAA CGCGTCGACC CCGACACCGG TGAACGGAAA
CGGTTCTCCT CGGCGATCCT GCCGGCCTGG GCGCGCAAGT CACCGCAGAT GAGCGAAGTG
CTGCCGCTGC TGTACCTGCA CGGGCTGTCC ACCAGCGACT TCACCCCCGC TCTGGAGCAG
TTCCTGGGCT CGGGGGCGGG GTTGTCGGCC TCGACGATTA CCCGGCTGAC CAGCCAGTGG
CAGGACGAGG CGGCGGCGTT CGGGCGCCGG GATCTGTCGG GCAGCGACTA CGTCTACCTG
TGGGTCGATG GCATTCACCT CAAGGTGCGT CTGGACCAGG AGAAGCTGTG TCTGCTGGTG
ATGCTCGGCG TGCGCGCGGA CGGCCGCAAA GAGCTTGTGG CGATCACCGA CGGCTACCGG
GAATCGACCG AGTCGTGGGC TGATCTGCTG CGCGACTGTA AACGACGCGG CATGACCGCA
CCCGTGCTCG CCGTCGGCGA TGGCGCACTC GGCTTCTGGA AAGCGGTACG CGAGGTGTTC
CCGGCCACCA AAGAACAGCG GTGCTGGTTT CATAAGCAAG CCAATGTGCT TGCCGCCCTG
CCGAAATCAG CGCACGCGTC GGCGTTGTCG GCACTCAAGG AGATCTACAA CGCCGAGGAT
ATCGACAAGG CCCAGGTCGC GGTCAAGGCC TTCACGGTCG ACTTCGGGGC CAAGTACCCC
AAGGCGGTCG CCAAGATCAC CGACGATCTG GACACCCTAC TGGAGTTCTA CCACTATCCC
GCCGAGCACT GGATCCACCT ACGCACGACA AATCCGATCG AAAGCACCTT TGCCACAGTA
CGTTTGAGAA CCAAGGTCAC CAAGGGGCCG GGATCACGTG CGGCTGGTCT GGCCATGGCC
TACAAGCTCA TCGACGCCGC CGCGGCCCGC TGGCGTGCCG TCAACGCACC ACACCTGGTC
GCCCTGGTCC GCGCCGGCGC GGTCTTCCAC AAGGGCAAAC TGCTCGAACG CCCCACCGAA
ATCACCCCAC CGACACCGCC CTCAGACGGC GATCAGCAAG CCGGAACGGA GGTCGCCTGA
|
|---|
| Protein sequence | MLTVVHDAIE ANESTGGAGR SLLDEIVRDG ARQMLAAALQ AEVAAYVAQF ADQLDEKGHR
LVVRNGYHQV REVLTAAGAV EVKAPRVNDK RVDPDTGERK RFSSAILPAW ARKSPQMSEV
LPLLYLHGLS TSDFTPALEQ FLGSGAGLSA STITRLTSQW QDEAAAFGRR DLSGSDYVYL
WVDGIHLKVR LDQEKLCLLV MLGVRADGRK ELVAITDGYR ESTESWADLL RDCKRRGMTA
PVLAVGDGAL GFWKAVREVF PATKEQRCWF HKQANVLAAL PKSAHASALS ALKEIYNAED
IDKAQVAVKA FTVDFGAKYP KAVAKITDDL DTLLEFYHYP AEHWIHLRTT NPIESTFATV
RLRTKVTKGP GSRAAGLAMA YKLIDAAAAR WRAVNAPHLV ALVRAGAVFH KGKLLERPTE
ITPPTPPSDG DQQAGTEVA
|
|---|
| |