Gene Mmcs_5431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_5431 
Symbol 
ID4114516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008147 
Strand
Start bp13254 
End bp14084 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content64% 
IMG OID638034586 
Productputative transposase for insertion element IS6110 (second part) 
Protein accessionYP_642587 
Protein GI108802391 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones82 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.15452 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGTTCA TCAGCGCTCA CCAGCACACT CGGGTGGGCG CTGATGGTCT CAAGTGGGGT 
GTCGAGTCGA TGTGCGCCGT GCTCTCGGAG TTCGGCGTCG CGATCGCCCC GTCGACGTAT
TACGCCCACC GCGCCCGCGG TGGCCCCTCG AGGGCCGATT GGTCTGACGC GCAGGTGATC
GATGCGATCT ACCGGCTCCG TCAATCCAAC CCGCTGTATC GGGTCCTGGG TGCTCGCAAG
ACATGGATTG TGTTGCGTAC CAACGGACTC AATGTTTCGC GGTGCGTGGT GGAGCGGGTC
ATGCGGGAGA TGGGCTGGCG CGGTGCGTGC AAGCGGCGCC GGGTCCGCAC CACCGTCGCC
GACCCGGCGG CGACACGGGC TCCAGATCAT GTTCGGCGGC GGTTCGTCGC CGAGGCGCCT
GACCGATTGT GGGTGGCTGA TTTCACGTAT TGCCGGACCC GGGCCGGCTG GGCTTATGCG
GCGTTCGTCA CCGATGTCTA TGCCCGCAAG ATCGTCGGCT GGAAGGTGGC TACCGAGATG
ACGCAGAAGC TGGTGACTGA TGCGATCAGT CACGCGATTG ATACCAGAAA GCGTTCTGGT
ACAACATCTT TAGATTCACT TATCCACCAC AGCGATGCGG GCTCTCAAGG CGGATTCAAC
TGGTCGTCGC AACACCTTGA TCACGGAGGT GTGGTGTGGC CAAGCGTAAG GACGCGGAAT
CGGTTGGTAG GCGACGGCAG TGGGCGGCTG ACCGTGCGTT GCGGCCTGCG ATGCGCTCAC
CAGGGCGCCC GGACCCGTCG CGGTCGGTGC AGCGTCAGTT TTGGCGGCTG A
 
Protein sequence
MEFISAHQHT RVGADGLKWG VESMCAVLSE FGVAIAPSTY YAHRARGGPS RADWSDAQVI 
DAIYRLRQSN PLYRVLGARK TWIVLRTNGL NVSRCVVERV MREMGWRGAC KRRRVRTTVA
DPAATRAPDH VRRRFVAEAP DRLWVADFTY CRTRAGWAYA AFVTDVYARK IVGWKVATEM
TQKLVTDAIS HAIDTRKRSG TTSLDSLIHH SDAGSQGGFN WSSQHLDHGG VVWPSVRTRN
RLVGDGSGRL TVRCGLRCAH QGARTRRGRC SVSFGG