| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_5425 |
|---|
| Symbol | |
|---|
| ID | 4114510 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008147 |
|---|
| Strand | - |
|---|
| Start bp | 7532 |
|---|
| End bp | 9223 |
|---|
| Gene Length | 1692 bp |
|---|
| Protein Length | 563 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638034580 |
|---|
| Product | pyruvate ferredoxin/flavodoxin oxidoreductase |
|---|
| Protein accession | YP_642581 |
|---|
| Protein GI | 108802385 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.408146 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGCCG AGGGCAGTCA GTGGATCGGC CAGGCACCGT TCACCGATGT GCCGCACCTG
TTCCAGAACA TCGGCGACGG GACTTTCTTC CACTCCGGTC AACTCGCGGT GCAGGCCTGT
GTCGCCGCCG GGGTCAACAT CACCTACAAG CTGCTGTGGA ACGAAGTTGT GGCGATGACG
GGCGCCCAGC ACGCAGAGGG CGCGGTCACC GTCGCGCAGT TGACGCGCAA ACTGACCGCC
GAAGGCGTGC GGCAGATCAT CATCTGCGCC GACGAACCCG AGCGCCACCA CAGGCGCGCA
CTGGCCAAAG GCACGCTCGT CTGGCACCGC GACCGCCTCG ACGAAGCCCA GAAGCGCTTG
CGCGACATCG AGGGCGTCAC CGTCCTCATT TACGACCAGC ATTGCGCTGC CGACGCGCGC
AGGCAACGCA AGCGCGGCAC CCTGCCCGCT CGCACCACCC GGGTGCTGAT CAACGAAGCG
GTCTGCGAAG GGTGCGGAGA CTGCGGCGTG AAATCGAATT GTCTGTCCGT CCAACCGGTG
GACACCGAGT ACGGCCGCAA GACCCGGATC GACCAGACCT CGTGCAACAC CGACTACAGC
TGCCTCGACG GGGACTGCCC CTCGTTCGTC ACCGTCGAGG TGCGGCCCGA CGCGATGCGT
CGTCATCGCA CCACCCCGAC ACCGCCCGCA TTGCCCGACG TCGATACCGG GGCCGTAACA
GATACGCACA ACGTCTTTTT CGCCGGAATC GGCGGCACCG GCATCGTCAC GGTCAACCAG
GTGCTCGCCA CCGCGGCGTT GCGCGCCGGC TATGACGTGG AAAGCCTGGA CCAGATCGGG
CTCAGCCAGA AGGCGGGCCC CGTCGTGTCG CACCTGCGGT TCGCGGCAGG CAAACTCGAC
CCGGCCAACC GGCTGACTCC CGGCAGCGCG GACTGCATCA TAGCCTTTGA TCTCCTCGTC
GCCGCCGATT CCAAGAACCT CGGTTACGGT GATCTGGCGA AGACCATCTC TGTCGCGTCG
ACCAGCAAGA CGTCCACCGG CGACATGGTG TACGACAAGA CGATCGCCTA CCCTGAGACG
CCGTACCTGC TCCACCGTCT CGATCAGGTA TCGCATCGCG TGCACGGCTT CGATGCGCTG
GAGGCGGCCC GCACGTTGTT CGGCGACACC GCCACCGCGA ACTTCCTGCT GGTCGGCGCC
GCCTGTCAGA CGGGTGCGCT GGGAATCCCG GCCGCCGCGA TCGAGGAGGC CATCGAGATC
AACGGCGTGG CAGTCGAGAC CAATGTCGCT GCGTTCCGGT GGGGCCGCGC TGCCATCGCT
GACCCCATCC GCTTTCACGA CGTCGTCTCA CCGGTCCCCG ACCGCCATCC CACGCCCCTG
CCGGCCCGCG TCCTCGACGG CGCGACGTTC TCCGGGCACG TCGGGGATCT CATCACTCGA
CGCGCCGCCG ACCTCGTCGC GTTCCAGAGC GAAAAGGTCG CCCGCCGTTT TCGGCTCCTC
GGCGACCGAT CTCTGCAGGA CCATGCATGG CGAATAGCTG CCAAGCTCAA CTGGCCCGAT
ACCTACCAGG CCGAGTACAT CGCACTGACC CAGTTGCAGG CCGACGCACT GGCCACCGCG
GACCCGCAGC TTGCCGCCGC AGCGCGTACC TTCGTTCCAG CCGTGACACC AGCAGACATC
CTGAGGCCAT AA
|
|---|
| Protein sequence | MGAEGSQWIG QAPFTDVPHL FQNIGDGTFF HSGQLAVQAC VAAGVNITYK LLWNEVVAMT
GAQHAEGAVT VAQLTRKLTA EGVRQIIICA DEPERHHRRA LAKGTLVWHR DRLDEAQKRL
RDIEGVTVLI YDQHCAADAR RQRKRGTLPA RTTRVLINEA VCEGCGDCGV KSNCLSVQPV
DTEYGRKTRI DQTSCNTDYS CLDGDCPSFV TVEVRPDAMR RHRTTPTPPA LPDVDTGAVT
DTHNVFFAGI GGTGIVTVNQ VLATAALRAG YDVESLDQIG LSQKAGPVVS HLRFAAGKLD
PANRLTPGSA DCIIAFDLLV AADSKNLGYG DLAKTISVAS TSKTSTGDMV YDKTIAYPET
PYLLHRLDQV SHRVHGFDAL EAARTLFGDT ATANFLLVGA ACQTGALGIP AAAIEEAIEI
NGVAVETNVA AFRWGRAAIA DPIRFHDVVS PVPDRHPTPL PARVLDGATF SGHVGDLITR
RAADLVAFQS EKVARRFRLL GDRSLQDHAW RIAAKLNWPD TYQAEYIALT QLQADALATA
DPQLAAAART FVPAVTPADI LRP
|
|---|
| |