| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_5400 |
|---|
| Symbol | |
|---|
| ID | 4114226 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 5691358 |
|---|
| End bp | 5695149 |
|---|
| Gene Length | 3792 bp |
|---|
| Protein Length | 1263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638034555 |
|---|
| Product | integral membrane protein MviN |
|---|
| Protein accession | YP_642556 |
|---|
| Protein GI | 108802359 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
|---|
| TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCA CCGGGTGGGA ACCGGGTCCC CCGCCGAACC GGCCGCCCGA TCCCCCGGCA
CAGCCGTTCC CGCCGCCGCG CCGCATCCCG CCCCCGCCCG GAGCCGCACG CCCGGGACCT
GGCCGACGCC CACCGCCCGC CCCACCGCGG CAGCGCGTCC CGCGCGGTCC GGCCCCCCGC
CGCCGGGCCG GCCGGCCGGA ACTGTCCGAC GCGGCCGTCG TCTCACGCTC GTGGGGTATG
GCGGTCGCGA CGTTGGTCAG CCGCATCACC GGATTCCTGC GGATCGTGCT GCTCGCCGCC
ATCCTCGGTG CCGCGCTGTC GAGCTCGTTC ACGGTGGCCA ACCAGCTGCC GAACCTGGTC
GCGGCGCTGG TGCTCGAGGC CACCTTCACC GCGATCTTCG TGCCGGTCCT GGCCCGCGCC
GAACGCGACG ACCCCGACGG CGGGACCGCC TTCGTGCGCC GCCTGGTCAC CCTGGCGACC
ACACTGCTGC TGGCGGCCAC GGTGCTCTCG GTCGCGGGCG CACCCCTGCT CGTGCGGTTG
ATGCTCGGGG ACGACCCGCA GGTCAACAAT CCGCTGACGA CGGCGTTCGC CTACCTGCTG
CTGCCGCAGG TGCTGTTCTA CGGGTTGTCC TCGGTGTTCA TGGCAATCCT CAACACCCGC
AACGTCTTCG GGCCGCCGGC GTGGGCGCCG GTGGTCAACA ACGTGGTCGC CATCGCCACC
CTGGTGCTGT ATCTGATCGT GCCGGGCGAA CTCTCGGTCG ACCCCGTCGA GATGGGCAAC
GCCAAACTGC TGGTGCTGGG CATCGGCACG ACGCTCGGCG TCTTCGCCCA GACCGCGGTC
CTGCTCGTCG CGATCCGTCG CGAACGGATC AGCCTGCGCC CGCTGTGGGG GATCGACGAC
CGCCTCAAGA AGTTCGGCAC GATGGCCGCG GCGATGGTGC TCTACGTGCT CATCAGCCAG
ATCGGGCTGA TCGTCACGAA CCAGATCGCC AGCGCCTCGG CGGCGTCCGG ACCGGCGATC
TACAACTACA CCTGGCTGGT GCTGATGCTG CCGTTCGGGA TGATCGGCGT CACGGTGCTC
ACCGTCGTGA TGCCCCGGCT GTCCCGTAAC GCCGCCGCCG ACGACATCCC CGCCGTGCTG
GGCGACCTGT CGCTGGCCAC CCGGCTCACC ATGGTCACGC TGATCCCGAT CGTCGCGGTC
ATGACCGTGG GCGGCCCGGC GATCGGCACC GCGCTGTTCG CCTACGGCAA CTTCGGTGAG
ACCGACGCCG GCTACCTGGG CATGGCCATC ACGCTGTCGG CGTTCACGCT GATCCCCTAC
GCGCTCGTGC TCCTGCAATT GCGGGTCTTC TACGCGCGTG AGCAGCCGTG GACGCCGATC
ATCGTGATCA TCGTCGTGAC CACCGTCAAG GTGATCGCCT CGCTCGCCGC ACCGGCGATG
ACCGACGATC CGGAGCTGGT GGCCGGATAC CTCGGCCTGG CGAATGGTCT CGGCTTCCTC
GCGGGTGCGG TGGTCGGCCA TTTCCTGCTG AAATCCAGCC TGCGCCCCCC GGGCGGCCGG
ATGTTCGACG TGCAGGTGAT CCGCACGATC CTGGTCACCA TCGCCGCCTC CCTGCTGGCC
GGCCTGCTCG CCCACGTCGC CGATCAGCTG CTCGGCCTGG AGTCGCTGAC GGCCGATGCC
GGCGGTGTGG GATCGCTGGT GCGGCTTGCG GTGCTGGGTC TGATCATGGT GCCGGTGATC
GCGGGGGTGC TGCTCGCGGC GCGGGTGCCC GAAGCCGACG CCGCCGTCGC GTTCGTCCGC
AGGCGGCTCG GCAGGTCCGC GCCGGCACCC GCCGCGTCAA TATCTCGACC CGACCAACCG
CGGCCCGCCG GTGCCTTCCC GTACTCTGAC GGCAGGAGTG CGCGTCCGGT GCGGCGGAGT
CGGGGCCCCG CGACCGGCCG GTACGACCCT CCGGTTCGGG GAACTCCGGT GCATGGCGCC
GGGGCAGAAA GGTGGAGAGG ACCAGCGGTG AGCGACGACT CCGCGGGTGA TTCCGCAGCG
GCGCCCGACA GCGCGTCGAC CACCAGAATC TCGCGGCCCG CCGCGGATAC CCATACGCGG
CCCGCCGCGG AAACCCATTC GCGGCCCGCC GCGGACGATT TCCAGCCCGA CGTCCCCGAA
ACCCCCTCCG CACCCGCCGA CCGGTCGGCC ACCGCGGAGA TGCCCACGTC CGGCCGTCCG
CCCGCGGACT ACGGCGGCGA TCCCACCCGG GAATCGCTGC CCTTCGACGC GCCGCGCGAA
CCGGCCATCG AGGCAGCCAC CTCCGACGAG GACGTCCACC TCATCCCCGG CGCGACGATC
AGCGGCGGCC GCTACCGCCT GCTGGTGTTC CACGGCGGAC CCCCCAACCT GCAGTTCTGG
CAGGCTCTCG ACACCGCGCT CGACCGTCAG GTCGCGTTGA CCTTCGTCGA CCCGGACGCC
ACTCTGCCGG ACGAGCGGGT GCAGGACATC CTGGCGCGCA CACTCAAGCT CAGCCGCCTC
GACATGCCGG GGGTGGCCCG CGTCCTCGAC GTCGCCAACA CCGGATCCGG TGGGCTGATC
GTCTCGGAGT GGATCCGCGG CGGGTCGCTG GCCGAGGTCG CCGAGACCGC ACCCTCACCG
ATCGGCGGCG CCCGCGCGAT CCAGTCGCTC GCCGCGGCCG CCGAGGCCGC GCACCGCGCC
GGGGTGGCGT TGTCGATCGA CCATCCCAGC CGCGTCCGGG TCAGCATCGA GGGCGACGTC
GCCCTGGCGT TCCCGGCCAC CATGCCCGAC GCCACGCCGG AGGACGACAT CCGCGGTATC
GGCGCCGCGC TGTACGCATT GCTGGTCAAC CGCTGGCCGC TGCCCGAGAC CGGGGTGCCC
AGCGGACTCG CCCCCGCCGA CCGCGACCCG GCGGGCGACC CGCTCGAACC GCGGGCGGTG
GACCGGGAGA TCCCGTTCCA GATCTCGGCG GCGGCTGCGC ACGCCGTACA ACCCGACGGC
GGCATCCGCA GCGCACCGAC GCTGCTGAAC CTCCTGCAGC AGGCCACCGC CGTGGCCGAC
CGCACCGACC TGATCTCACC GGTCGACCGG CCCGACGGCG GCACCCCGTC GCGCTTCCGC
GGCGAACCCG ACGACGACCC GGAGGCGCAG GCCCGCCGCA AGCGCGGGTT GATGGTCGGC
CTCACGGTCG GCGGCGTGAT CGTCGTCGTC GCGCTCATCG TGCTGGCGAC CGTGCTGAGC
CGCATCTTCG GTGACGTCGG CGGCGGGTTC GACGGCGACG AACTCGGCCT CAACGCCCCG
ACCACCTCCG AAGAGGCCGA GGGCGGGTCG ACGGCGCCGG GCAACGTGGT GCGTCCGGTG
CGGGCGACGG TGTTCTCCCC CGCCGGCGGC GCCGACTCCC CGGATCAGGC CGGCAACGCC
ATCGACGGGA ACTCGACGAC GGTGTGGCCC ACCGACATCT ACTCCGATCC GAACCCGTTC
CCGAACTTCA AGAACGGCGT GGGGCTGATG CTCGAGCTGC CGCAGCCCAC CACGATCAGT
TCGGTGGACG TCAACGTCTC CTCGACCGGC ACCTCGGTGC AGATCCGGTC GGCGCAGTCG
GCCGAACCGT CGTCGCTCGA GAGCACCACC GAGATGACCC CGTCGACGCC GTTGAGCACC
GGCAACAACA CCATCGAGGT CAGCGACGCC TCCCCCACCT CGTTCGTGCT GGTGTGGATC
GACAAACTCG GCACCGTCAA CGGTGAGAGC CGCACCGACA TCTCCGAGAT CACGCTCAAG
GGCACCTCGT AG
|
|---|
| Protein sequence | MSTTGWEPGP PPNRPPDPPA QPFPPPRRIP PPPGAARPGP GRRPPPAPPR QRVPRGPAPR
RRAGRPELSD AAVVSRSWGM AVATLVSRIT GFLRIVLLAA ILGAALSSSF TVANQLPNLV
AALVLEATFT AIFVPVLARA ERDDPDGGTA FVRRLVTLAT TLLLAATVLS VAGAPLLVRL
MLGDDPQVNN PLTTAFAYLL LPQVLFYGLS SVFMAILNTR NVFGPPAWAP VVNNVVAIAT
LVLYLIVPGE LSVDPVEMGN AKLLVLGIGT TLGVFAQTAV LLVAIRRERI SLRPLWGIDD
RLKKFGTMAA AMVLYVLISQ IGLIVTNQIA SASAASGPAI YNYTWLVLML PFGMIGVTVL
TVVMPRLSRN AAADDIPAVL GDLSLATRLT MVTLIPIVAV MTVGGPAIGT ALFAYGNFGE
TDAGYLGMAI TLSAFTLIPY ALVLLQLRVF YAREQPWTPI IVIIVVTTVK VIASLAAPAM
TDDPELVAGY LGLANGLGFL AGAVVGHFLL KSSLRPPGGR MFDVQVIRTI LVTIAASLLA
GLLAHVADQL LGLESLTADA GGVGSLVRLA VLGLIMVPVI AGVLLAARVP EADAAVAFVR
RRLGRSAPAP AASISRPDQP RPAGAFPYSD GRSARPVRRS RGPATGRYDP PVRGTPVHGA
GAERWRGPAV SDDSAGDSAA APDSASTTRI SRPAADTHTR PAAETHSRPA ADDFQPDVPE
TPSAPADRSA TAEMPTSGRP PADYGGDPTR ESLPFDAPRE PAIEAATSDE DVHLIPGATI
SGGRYRLLVF HGGPPNLQFW QALDTALDRQ VALTFVDPDA TLPDERVQDI LARTLKLSRL
DMPGVARVLD VANTGSGGLI VSEWIRGGSL AEVAETAPSP IGGARAIQSL AAAAEAAHRA
GVALSIDHPS RVRVSIEGDV ALAFPATMPD ATPEDDIRGI GAALYALLVN RWPLPETGVP
SGLAPADRDP AGDPLEPRAV DREIPFQISA AAAHAVQPDG GIRSAPTLLN LLQQATAVAD
RTDLISPVDR PDGGTPSRFR GEPDDDPEAQ ARRKRGLMVG LTVGGVIVVV ALIVLATVLS
RIFGDVGGGF DGDELGLNAP TTSEEAEGGS TAPGNVVRPV RATVFSPAGG ADSPDQAGNA
IDGNSTTVWP TDIYSDPNPF PNFKNGVGLM LELPQPTTIS SVDVNVSSTG TSVQIRSAQS
AEPSSLESTT EMTPSTPLST GNNTIEVSDA SPTSFVLVWI DKLGTVNGES RTDISEITLK
GTS
|
|---|
| |