| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_5393 |
|---|
| Symbol | |
|---|
| ID | 4114219 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 5682719 |
|---|
| End bp | 5684002 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 638034548 |
|---|
| Product | putative integral membrane protein |
|---|
| Protein accession | YP_642549 |
|---|
| Protein GI | 108802352 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTTGACG CTCGCGCGCC GAAAGCCGTG TGGCAGTCGG CGCGCGGGCT TCCAGAGTTC
TGGCGGCTGC TCGAACTGCG CGCGGTCAGC CAGTTCGGTG AGGGTCTGTT CCAGGCCGGG
CTGGCCGGGG CGATCCTGTT CAACCCGGAC CGCGCCGCCA CGCCGTGGGC GATCGCCGGA
TCGTTCGCGG TGCTGTTCCT GCCGTACTCG CTGCTGGGTC CGTTCGCCGG CGCGCTGCTC
GACCGGTGGG ATCGCCGGCT CGTCCTGATC GGCGCGAATT CGGCGCGGCT CGTACTGGTG
CTCGGGGTGG CCGCACTGCT CGCCGGGCGG GTCGGCGATC TGCCGATCCT GTTGGGCGCG
TTGGTCGTCA ACGGGTTCAC CCGCTTCGTG TCCTCGGGTC TGTCGGCGGC GCTGCCGCAT
GTCGTGCCGC GCGAGCAGGT GGTCGCGATG AACTCCGTGG CGGCGGCCAC CGGTGCGGTG
GCCGCGTTCC TCGGTGCGAA CTTCATGCTG TTGCCGCGCT GGGCCTTCGG GGCCGACGAC
GCCGGCGCCT CGGCGATCAT CCTCATCGCC GCGCTGCCCG TGGCGCTGGC GCTGCTGTTG
TCGATCCGGT TCGCCGCACA TGTGCTCGGC CCGGACGACA GCGCGCGGGC CGTCCACGGG
TCCGTCGCGT ACGCGGTCGC GACGGGGTGG CTGCACGGTG CGCGGACCGT GCTGTCGGTG
CGGGCGGTCG CGGCCACACT GTCCGGCCTC GGCGCGCACC GCGTGGTGTT CGGGGTCAAC
ACGCTGCTGG TGCTGGTGAT GGTGCGCCAC AGCGACACCG CGGCCGTCGC CGGGCTCGGC
ACCACGGTGC TCTTCGTCGC CGCCACCGGC GCCGGCTCGT TCCTCGCGAC GGTCGCCACG
CCGTCGCTGA TCACCCGCTG GGGCCGCTAC CGCACCGCCA ACGGCGCGCT CGTCGCGGCG
ACCGTCATCC AGCTCGCGGC GATCGGTCTC CAGCTGCCCG TGATGGTGAT CTGCGGATCA
CTGCTCGGCG CCGCCGGGCA GATCGTCAAA CTCTGCGCCG ACAACGCGAT GCAGCTGGAC
GTCGACGACG CGCTGCGCGG TCACGTCTTC ACCGTGCAGG ACTCGCTGTT CTGGATGGCG
TTCATCGGCG CCATCGCGGC GGCGGCGGTG GTCATCCCGG CCGACGGCCG CGCCCCGGGT
TTGGCGGCCG CCGGTGTCGG CGTGTACCTC GTCGGGTTGG CGCTGCACGC CGTGTTGGGG
CGGCCGTCGC ACGCGCGCAA TTAG
|
|---|
| Protein sequence | MVDARAPKAV WQSARGLPEF WRLLELRAVS QFGEGLFQAG LAGAILFNPD RAATPWAIAG
SFAVLFLPYS LLGPFAGALL DRWDRRLVLI GANSARLVLV LGVAALLAGR VGDLPILLGA
LVVNGFTRFV SSGLSAALPH VVPREQVVAM NSVAAATGAV AAFLGANFML LPRWAFGADD
AGASAIILIA ALPVALALLL SIRFAAHVLG PDDSARAVHG SVAYAVATGW LHGARTVLSV
RAVAATLSGL GAHRVVFGVN TLLVLVMVRH SDTAAVAGLG TTVLFVAATG AGSFLATVAT
PSLITRWGRY RTANGALVAA TVIQLAAIGL QLPVMVICGS LLGAAGQIVK LCADNAMQLD
VDDALRGHVF TVQDSLFWMA FIGAIAAAAV VIPADGRAPG LAAAGVGVYL VGLALHAVLG
RPSHARN
|
|---|
| |