| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_5375 |
|---|
| Symbol | |
|---|
| ID | 4114201 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 5662132 |
|---|
| End bp | 5662677 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638034530 |
|---|
| Product | PadR family transcriptional regulator |
|---|
| Protein accession | YP_642531 |
|---|
| Protein GI | 108802334 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1695] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.658005 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTGGAAC TCGCCATTCT CGGTCTGCTG CTCGAATCGC CGATGCACGG CTATGAACTG
CGCAAACGGC TGACCGGCCT GCTGGGCGCA TTCCGTGCGT TCTCGTACGG TTCGCTGTAT
CCGGCGCTGC GCCGCATGCA GGTCGACGGG CTGATCGTCG AGGACGCCGC ACCGGCGGGC
ACGGTGACGC GTCGCCGGGC CCGGCGGGTG TACCAGCTCA CCGACGCCGG CAAGCAACGC
TTCGCCGAAC TCGTGGCGGA CACCGGCCCG CAGAACTACT CCGACGACGG ATTCGGTGTG
CATCTCGCCT TCTTCAACCG CACCCCGGCG GAAGCCAGGA TGCGGATCCT GGAGGGTCGC
CGCCGTCAGG TGGAGGAACG TCGCGAAGGT CTGCGTGAAG CAGTCGCGCG GGCCAGCAGC
TCATTCGATC GATACACCCG GCAGCTGCAC CAGCTGGGGT TGGAGTCCAG CGAGCGCGAA
GTGAAGTGGC TCAACGAACT CATCGCGGCG GAACGTCTCG GGCAGGGAAG TCCGGACAAC
ACGTGA
|
|---|
| Protein sequence | MLELAILGLL LESPMHGYEL RKRLTGLLGA FRAFSYGSLY PALRRMQVDG LIVEDAAPAG
TVTRRRARRV YQLTDAGKQR FAELVADTGP QNYSDDGFGV HLAFFNRTPA EARMRILEGR
RRQVEERREG LREAVARASS SFDRYTRQLH QLGLESSERE VKWLNELIAA ERLGQGSPDN
T
|
|---|
| |