Gene Mmcs_5371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_5371 
Symbol 
ID4114197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp5656337 
End bp5657971 
Gene Length1635 bp 
Protein Length544 aa 
Translation table11 
GC content69% 
IMG OID638034526 
Producthypothetical protein 
Protein accessionYP_642527 
Protein GI108802330 
COG category[S] Function unknown 
COG ID[COG5650] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.658284 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCGCCGT CGCCGCTTGC GCAGGATCTG CGCAGCGCGG AGGACCGCGA CCTGCCCAGC 
CGCACCGACC GGATCGGCGC CGCGCTGTCG GAGACGATCG GCGGCCCGGT GGGCCGGCAC
GCCCTCATCG GCCGTCAGCG TCTGATGACG CCGCTGCGGG TGATGCTGAT CATCGCCGTG
GTGTTCCTGG CACTGGGCTA TTCGACGAAG GCCGCCTGCC TGCAGACCAC GGGCGGCGGA
TCGGCCGACC AACGCGTGGC CAACTGGGAC AACAACCGCG CGTACTACCA GCTCTGCTAC
TCCGACACCG TGCCGCTCTA CACCGCGGAA CTGTTGAACC AGGGCAAGTT CCCGTACAAG
TCGAGCTGGA TCGAGACCGA CGGCAGCGGT GAGCCCCGCA TGACCTACGA CGGTCAGGTC
GCGGTGCGGT ACATGGAGTA TCCGGTGCTG ACCGGGCTGT ACCAGTACGT GTCGATGGCG
CTGGCCAAGA CGTACTCGGC GGTCACGCGC GCGGCGTCGA TCCCGGTGGT CGCCGAGGTG
GTGATGTTCT TCAACATCGC CGCGTTCGGG CTGGCGTTGG CGTGGTTGGC GACGGTGTGG
GCGACGGCGA TGCTAGCCGG CCGTCGCGTG TGGGATGCGG CCCTGGTCGC CGCGTCACCG
CTGGTGATCT TCCAGATCTT CACCAATTTC GACGCGCTGG CAACGGCTTT CGCGGTCGGC
GCGATGCTCG CCTGGGCGCG GCGAAGACCG GTGCTGGCCG GTGCGCTGAT CGGCCTCGGG
GTGGCGGCGA AGCTGTATCC CCTGCTGCTG TTGGTGCCCC TGGCGCTGCT GGCGGTGCGG
ACCGGGCGGT GGCGTGAGGT CGCGAAGACG GCGGCCACGG CGTTCGCCAC GTGGCTGCTG
GTCAACCTGC CGATCATGGT GCTGTTCCCA CGCGGATGGT CGGAGTTCTT CCGGCTCAAC
ACCCGTCGCG GTGACGACAT GGATTCGCTC TACAACGTGG TGAAGTCGTT CACCGGATGG
GGCGGGTTCG ACACCGGCCT CGGTTTCTGG CAGCCACCGA CCGTCCTGAA CGCCGTGACC
GCGGTGTTGT TCGCCTCGTG CTGTATCGCC ATCGGGGTCA TCGCGCTGAC CGCCCGGCAG
CGGCCGCGCC TGGCGCAACT GGCGTTCCTG GTGGTGGCGG CGTTCCTGTT GACGAACAAG
GTGTGGAGTC CGCAGTTCTC GCTGTGGCTG GTGCCGCTGG CGGTGCTCGC GCTGCCGCAC
CGGCGGATCC TGTTGGCGTG GATGACGATC GACGCGCTGG TCTGGGTGCC CCGGATGCTC
TATCTCTACG GCGAAGCCAA CCGGGGCCTG CCCGAACAGT GGTTCACCGC GACGGTGCTG
CTGCGTGACA TCGCGGTGAT CACGTTGTGC GCGTTGGTGA TCCGGCAGAT CTACCGGCCG
GAACTCGACC TGGTCCGGTA CGGCGGCCGG GTCGACGACC CGGCGGGCGG GGTCTTCGAC
CGGGCCCCCG ACGATCCGCC GCGCTGGCTG CCCGACTGGT TGCGCCCGAC GGGACAGCGG
GTCCGCGTCG ACGCACCGCC ACCGGCTCCC GACGAGGAGC CGACGGATTT CGCAGCTCAG
ACCCGTCTCC TGTAG
 
Protein sequence
MSPSPLAQDL RSAEDRDLPS RTDRIGAALS ETIGGPVGRH ALIGRQRLMT PLRVMLIIAV 
VFLALGYSTK AACLQTTGGG SADQRVANWD NNRAYYQLCY SDTVPLYTAE LLNQGKFPYK
SSWIETDGSG EPRMTYDGQV AVRYMEYPVL TGLYQYVSMA LAKTYSAVTR AASIPVVAEV
VMFFNIAAFG LALAWLATVW ATAMLAGRRV WDAALVAASP LVIFQIFTNF DALATAFAVG
AMLAWARRRP VLAGALIGLG VAAKLYPLLL LVPLALLAVR TGRWREVAKT AATAFATWLL
VNLPIMVLFP RGWSEFFRLN TRRGDDMDSL YNVVKSFTGW GGFDTGLGFW QPPTVLNAVT
AVLFASCCIA IGVIALTARQ RPRLAQLAFL VVAAFLLTNK VWSPQFSLWL VPLAVLALPH
RRILLAWMTI DALVWVPRML YLYGEANRGL PEQWFTATVL LRDIAVITLC ALVIRQIYRP
ELDLVRYGGR VDDPAGGVFD RAPDDPPRWL PDWLRPTGQR VRVDAPPPAP DEEPTDFAAQ
TRLL