Gene Mmcs_5321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_5321 
Symbol 
ID4114148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp5605581 
End bp5606669 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content70% 
IMG OID638034477 
ProductYVTN beta-propeller repeat-containing protein 
Protein accessionYP_642478 
Protein GI108802281 
COG category[S] Function unknown 
COG ID[COG3391] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02276] 40-residue YVTN family beta-propeller repeat 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTCC GAACGGAAGC GCTGCTGTCC GCCCTACTGC TGGCAGTGGC GCTTGCGGGC 
TGCGCCGGCG GTGACCCCGA GACCGCCGGC CAGTCACCGC CGCGCCCGAC TCCGCCCCCG
CGGTCGGCCG GAGTGACCGG ATCGTTGTGG GTTGCCGATG AGGGCGGGAA CAGCCTGACG
GTGCTCGATA CGACCGCCGA TTCCGTGGCG ACCACCCTGA CCGGCATTCA GGCGCCGCAC
AACGTCCAGG TCGGTCGGGA CGCCGCCGTG GTCTACGCGA CCAGCGCCGG GACCGACACG
GTCGTGGCCA TCGACGCCGA TACCTACACC GTCGCCGCGA CCGCCGAGAC CGGCTCCCAT
CCGGCGCATG TGATCGAGGC GCCCAACGGC AAGGTCTATG TGGCCGACTC CGAAGCCGGC
ACCGTGTCGG TGTTCCAGGG TCAGGACCTG CGGTCGCTGG GCCGCATCGA GGTGGGCGGG
ATGCCGCACG GGCTACGCGC GGCACCCGAC GGTTCGGTGA TCGTCGTCGC CAATCACATG
ACCGGCGCAC TGGATGTGAT CGACGCCCGG ACCGACCAGA AGACGTTCTC GGTGCCGGTC
GGTGAGGGAC CCGCCCAGGT TGCGGTCAGC GCGGACGGGT GGCACGCCTA CACCGGGGTC
ACAGATCCGG CGTCGGTGGT CAAAGTCGAC CTCGACAGCC GAACGGTGGT CGGCAGGGTC
GCGGTGTCTG CGGCACCGGT GCAGGTGTAC CTCAGCCCCG ACGACGCGAT GGTGGTATCC
GCCGACCAGG GCAGCCCGGA CGCCCCCGGG CATGCCGCCT CGCTGATCGA CACCCGCACG
ATGTCGGTGC GCGCCACCGT CGAGACCGGG GCAGGCCCGC ACGGGGTGGT GATCGATTCC
AGCGGTCGCC GCGCGTGGGT GACCAACAGT TACGACGACA GCGTGTCGGT CATCGATCTG
GCCGGCGAGA GGGTGTCCAC GACGATCCCG GTGGGTAAGG GGCCCAACGG CATCAGCTAC
TCGCCTCGCC CGCCCGCGGC CGGTGCATCC GACATTGCCC TGAATCTCAC CGCACCAGCA
CACGGGTGA
 
Protein sequence
MKLRTEALLS ALLLAVALAG CAGGDPETAG QSPPRPTPPP RSAGVTGSLW VADEGGNSLT 
VLDTTADSVA TTLTGIQAPH NVQVGRDAAV VYATSAGTDT VVAIDADTYT VAATAETGSH
PAHVIEAPNG KVYVADSEAG TVSVFQGQDL RSLGRIEVGG MPHGLRAAPD GSVIVVANHM
TGALDVIDAR TDQKTFSVPV GEGPAQVAVS ADGWHAYTGV TDPASVVKVD LDSRTVVGRV
AVSAAPVQVY LSPDDAMVVS ADQGSPDAPG HAASLIDTRT MSVRATVETG AGPHGVVIDS
SGRRAWVTNS YDDSVSVIDL AGERVSTTIP VGKGPNGISY SPRPPAAGAS DIALNLTAPA
HG