Gene Mmcs_5306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_5306 
Symbol 
ID4114133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand+ 
Start bp5591918 
End bp5592499 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content68% 
IMG OID638034462 
ProductTetR family transcriptional regulator 
Protein accessionYP_642463 
Protein GI108802266 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.635344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGATC CGTCCACCCG CAGCCGGATC CTCGATGCGA CGGCGGAGTT GTATCGCCGG 
CAGGGCATGC CCGCCACCGG CCTCAAGCAG ATCTCGGCCG CGGCGCAGGC GGCGTTCGGT 
TCGATCTACC ACCACTTCCC CGGTGGCAAA GAGGCGATCA GCGTGGAAGT CATTCGCCGC 
GAAGGCATCC GGTACGCCAC GTTCGTCGGC GCGCAGTTGG CGCAGATCGA CCCGCTCGAC 
GGAATCCCCG AGTTGTTCGA GAAGGCGGGC AGGGATCTGG AGTCGCAGGA CTACAGCGAA 
GCCTGTTCGA TCGAGACGAT CGCGCTGGAG GTGGCCAGCA CCAACGAGCG GCTCCGGGTG 
GAGGCGGCGG AGGTGTTCCA GAGCTGGCTC GGCGGCCTCG CGGCGTGGTT CGGGCAGCTC 
GACCTCACCG AGGCGGAGTG CCGCCGGTTG GCGATGATCA CCCTGACGGC CCTCGAAGGC 
GCCTTCGTCC TGTGCCGCAC CCTGCGCTCG GTCGAACCCA TTGTCTGCGC GGGGCACGGG 
GTCCGGGCGG CCGTGCACGC GGCGGTTCGA AAGCCTGTCT AA
 
Protein sequence
MADPSTRSRI LDATAELYRR QGMPATGLKQ ISAAAQAAFG SIYHHFPGGK EAISVEVIRR 
EGIRYATFVG AQLAQIDPLD GIPELFEKAG RDLESQDYSE ACSIETIALE VASTNERLRV 
EAAEVFQSWL GGLAAWFGQL DLTEAECRRL AMITLTALEG AFVLCRTLRS VEPIVCAGHG 
VRAAVHAAVR KPV