| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_5294 |
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| Symbol | |
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| ID | 4114121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. MCS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008146 |
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| Strand | - |
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| Start bp | 5579842 |
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| End bp | 5581008 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638034450 |
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| Product | RNA polymerase ECF-subfamily sigma factor |
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| Protein accession | YP_642451 |
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| Protein GI | 108802254 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCGCCG ACCCGCTGGA CGCGGCGCGG TTGCGCGACC TGATTCCCGG CGTGCTGGCC
GCCCTCGTCC ACCGCGGGGC GGACTTCGCG ACCGCCGAGG ACGCAGTGCA GGAGGCGTTG
ATCCGAGCCG TCGAGACCTG GCCGGAGCAT CCGCCCGACG AGCCGAAGGG CTGGCTGATC
ACGACGGCGT GGCGCCGGTT CCTCGATCTC TCCCGGTCGG ACACTGCGCG TCGCCGGCGG
GAGGAACGGG TGTCCAACGA GCCGCCGCCG GGCCCGACCG AATCGGCCGA CGACACGCTG
CAGCTCTGTT TCCTGTGCGC CCATCCCAGT CTCACTCCGG CTTCGGCAGT GGCTCTGACG
CTGCGGGCCG TCGGCGGCTT GACCACCCGG CAGATCGCGC AGGCCTACCT GGTGCCCGAA
GCGACGATGG CGCAGCGGAT CAGCCGCGCC AAGCGCACCG TGAGCGGTGT CCGGCTGGAC
AGCCCCGGCG ACCTGCGCAC GGTGTGCCGG GTGCTGTACC TGATCTTCAA CGAGGGCTAC
AGCGGCGACG TCGACCTCGC CGGGGAGGCG ATCCGGTTGG CCCGTCAGCT TGCGCGCATG
ACCGACGATC CGGAGGTCGC CGGACTGCTC GCGCTGTTCC TGCTCCACCA CGCGCGCCGG
CCCGCGCGGA TCCGGGCCGA CGGCAGCCTG GTGCCGTTGG CCGACCAGGA CCGCAGCCGG
TGGCGACGTG ACCTGATCGC AGAGGGCGTG ACGATCCTGC AGGCCGCCCT GGCCCGCGAC
CGGCTCGGCG AGTACCAGGC CCAGGCCGCG ATCGCGGCCC TGCACGCCGA CGCCCGCACC
GTCGAAGAGA CCGACTGGGT GCAGATCGTC GAGTGGTACG ACGAGCTGGT CCGGCTCACC
GACAGCCCCG TCGTCCGGCT CAACCGGGCG GTCGCCGTCG GAGAGGCGGA CGGGCCGCGG
GCGGGACTCG CGGCGCTCGC CGAACTCGAC CCGTCACTGC CGCGGTACAG CGCATCGGCC
GCCCACCTCC ACGAGCGGGC GGGGGAAATC GCCACGGCCG CAGAGCTTTA CGTGCAGGCC
GCGAATCAGG CGCAGAACCT CGCCGAGCGG AACCATCTCA CGGTCCGCGC GGCCGCCCTC
CGTCAGCGCC TCGCGGGTGA CATCTAG
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| Protein sequence | MAADPLDAAR LRDLIPGVLA ALVHRGADFA TAEDAVQEAL IRAVETWPEH PPDEPKGWLI
TTAWRRFLDL SRSDTARRRR EERVSNEPPP GPTESADDTL QLCFLCAHPS LTPASAVALT
LRAVGGLTTR QIAQAYLVPE ATMAQRISRA KRTVSGVRLD SPGDLRTVCR VLYLIFNEGY
SGDVDLAGEA IRLARQLARM TDDPEVAGLL ALFLLHHARR PARIRADGSL VPLADQDRSR
WRRDLIAEGV TILQAALARD RLGEYQAQAA IAALHADART VEETDWVQIV EWYDELVRLT
DSPVVRLNRA VAVGEADGPR AGLAALAELD PSLPRYSASA AHLHERAGEI ATAAELYVQA
ANQAQNLAER NHLTVRAAAL RQRLAGDI
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