Gene Mmcs_5280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_5280 
Symbol 
ID4114107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp5568524 
End bp5569222 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content71% 
IMG OID638034436 
ProductABC transporter related 
Protein accessionYP_642437 
Protein GI108802240 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.312044 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGAGG GCATCGAGGT CGACGGCATC GTGTTCGACG GGGTCACCCA CGCGTACGGT 
GACCGCCCCG TACTGCGCGA CGTCTCGCTC ACCTTGTCCG AACGCCGGAT CGGCGTCGTC
GGGGCGAACG GCAGCGGCAA GTCGACGCTG GCGCGGATGA TCAACGGCCT GGTACTCCCG
GATCGGGGCG CGGTGCGGGT GCACGGCCTC GACACCCGGC GGGCGACCCG CAAGGTCCGG
CGCCGGGTCG GCTTCGTCTT CACCGACCCC GACCGCCAGA TCCTCATGCC GACCGTCGCC
GAGGACATCG AGCTGTCGCT GTCGCGGCAC GGGCTGAGCC GCGGCGAACG CGCGGCCCGC
ACCCGGCGGG TGCTCGACCG GTTCGGGCTC GCCGGACATG CGGACCACCC CGCCCACCTG
CTTTCCGGCG GTCAGAAGCA ACTGCTGGCG CTGGCGGCGG TACTGGTCAC CGAGCCCGGC
ATCGTGGTGG CCGACGAACC GACGACGCTG CTCGACCTGC GCAACACCGC GATGTTGCGC
GGCGCGTTCG CCACCCTGGA CACCCAGCTG ATCGTCGTGA CCCACGACCT CACCGTCGTC
GACGACTTCG ACCGCGTGAT CGTCCTCGAC GAGGGTGAGG TGGTGGCCGA CGACGTGCCG
GCGGTCGCGC TGTCGGCCTA CCGGCGGTTG ATGTCGTGA
 
Protein sequence
MGEGIEVDGI VFDGVTHAYG DRPVLRDVSL TLSERRIGVV GANGSGKSTL ARMINGLVLP 
DRGAVRVHGL DTRRATRKVR RRVGFVFTDP DRQILMPTVA EDIELSLSRH GLSRGERAAR
TRRVLDRFGL AGHADHPAHL LSGGQKQLLA LAAVLVTEPG IVVADEPTTL LDLRNTAMLR
GAFATLDTQL IVVTHDLTVV DDFDRVIVLD EGEVVADDVP AVALSAYRRL MS