Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_5280 |
Symbol | |
ID | 4114107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | - |
Start bp | 5568524 |
End bp | 5569222 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638034436 |
Product | ABC transporter related |
Protein accession | YP_642437 |
Protein GI | 108802240 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1122] ABC-type cobalt transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.312044 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGTGAGG GCATCGAGGT CGACGGCATC GTGTTCGACG GGGTCACCCA CGCGTACGGT GACCGCCCCG TACTGCGCGA CGTCTCGCTC ACCTTGTCCG AACGCCGGAT CGGCGTCGTC GGGGCGAACG GCAGCGGCAA GTCGACGCTG GCGCGGATGA TCAACGGCCT GGTACTCCCG GATCGGGGCG CGGTGCGGGT GCACGGCCTC GACACCCGGC GGGCGACCCG CAAGGTCCGG CGCCGGGTCG GCTTCGTCTT CACCGACCCC GACCGCCAGA TCCTCATGCC GACCGTCGCC GAGGACATCG AGCTGTCGCT GTCGCGGCAC GGGCTGAGCC GCGGCGAACG CGCGGCCCGC ACCCGGCGGG TGCTCGACCG GTTCGGGCTC GCCGGACATG CGGACCACCC CGCCCACCTG CTTTCCGGCG GTCAGAAGCA ACTGCTGGCG CTGGCGGCGG TACTGGTCAC CGAGCCCGGC ATCGTGGTGG CCGACGAACC GACGACGCTG CTCGACCTGC GCAACACCGC GATGTTGCGC GGCGCGTTCG CCACCCTGGA CACCCAGCTG ATCGTCGTGA CCCACGACCT CACCGTCGTC GACGACTTCG ACCGCGTGAT CGTCCTCGAC GAGGGTGAGG TGGTGGCCGA CGACGTGCCG GCGGTCGCGC TGTCGGCCTA CCGGCGGTTG ATGTCGTGA
|
Protein sequence | MGEGIEVDGI VFDGVTHAYG DRPVLRDVSL TLSERRIGVV GANGSGKSTL ARMINGLVLP DRGAVRVHGL DTRRATRKVR RRVGFVFTDP DRQILMPTVA EDIELSLSRH GLSRGERAAR TRRVLDRFGL AGHADHPAHL LSGGQKQLLA LAAVLVTEPG IVVADEPTTL LDLRNTAMLR GAFATLDTQL IVVTHDLTVV DDFDRVIVLD EGEVVADDVP AVALSAYRRL MS
|
| |