Gene Mmcs_5274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_5274 
Symbol 
ID4114101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand- 
Start bp5561305 
End bp5561943 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content70% 
IMG OID638034430 
ProductABC transporter, permease protein 
Protein accessionYP_642431 
Protein GI108802234 
COG category[S] Function unknown 
COG ID[COG4721] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGACG TGTCCCGACC CTTTCCTGAA CCTCCCGTCA AGACGGCGCG GACATACCGA 
TGGCGCGTCG TCGACATCGT GGTGGCCAGC GTGCTCGCCG TCGCGGCGGG CCTGGTGTTC 
GTCATGTGGA ACATCGCGTC CAACCCGATC GGCGCGCCCC TGAGCGCGCT GGCGCCGGGG 
CTGCAGGCGC TGCTGGGCGG TGGCTGGCTG TTCGCCGGGG TGCTCACCGC GATGGTGATC 
CGGAAACCGG GCGCCGCGGT CTACGGCGAA CTCGTGGCCG CGACGGTGTC CGCCCTGGTC 
GGCAACCAGT GGGGCGTCAT GACCCTGGAA TTCGGCCTCG TTCAGGGGCT GGCCGCCGAG 
ATCGTGTTCG CCTGCTTCCT GTACCGGGCG TGGAACCTGC CCGTCGCGGT GCTGGCCGGG 
GCCGCTGCCG GACTGGCCAT GGCGATCAAC GAACTTTTGC TCCTGTATCC GGGTTCGACC 
TCCGCCTTCG CGGCCATCTA CGTCGTCTCC GGGGTCGTCT CGGGGGCGGT CGTCGCCGGC 
GCATTGTCCT GGTACGTCGT CCGGGGGCTG GCGAAAACCG GTGCGCTGTC CCGTTTCCCG 
TCGGGCCGGA CAGGGTCGCC GAGCGACGTC CGGCGATGA
 
Protein sequence
MTDVSRPFPE PPVKTARTYR WRVVDIVVAS VLAVAAGLVF VMWNIASNPI GAPLSALAPG 
LQALLGGGWL FAGVLTAMVI RKPGAAVYGE LVAATVSALV GNQWGVMTLE FGLVQGLAAE 
IVFACFLYRA WNLPVAVLAG AAAGLAMAIN ELLLLYPGST SAFAAIYVVS GVVSGAVVAG 
ALSWYVVRGL AKTGALSRFP SGRTGSPSDV RR