Gene Mmcs_5269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_5269 
Symbol 
ID4114096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp5555932 
End bp5557167 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content69% 
IMG OID638034425 
Producthypothetical protein 
Protein accessionYP_642426 
Protein GI108802229 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3934] Endo-beta-mannanase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.280071 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCGGGGG CCGCGTGTGA CACCGAAACC GAAGTCGAAG CCGGAGACCG CACATTGACG 
AGCACACCCG ACGTGCCCGA AGCGAACCCG CGTCGCCCGT TCGCCCGACG CGCCGCGCTC
AAACTGCCCG CGCTGCTCAC GGCGTCGGCC GCGGCGTCGG CGTTGCCCCG CGCATCCGCG
GCGTCGCGCC GGTGGTCGGC CGCGCGCGCC CACGCCTGGT ATCAGCAGCA GGGCTGGCTG
GTGGGCGCGA ACTTCATCAC CTCGAACGCC GTCAACCAGT TGGAGATGTT CCAGGCCGCG
ACGTTCGACC GGCGGCGCAT CGACACCGAG CTGATGCTGG CGCGCCGGAT CGGGCTCAAC
ACCGTGCGGG TCTTCCTGCA CGACCAGCTG TGGGCGCAGG ACCGTAACGG CTTCCAGCGC
CGTCTCGCGC AGTTCGTCGC CATCGCCGCG CGGCACGACA TCCGCCCGCT GTTCGTCCTG
TTCGACTCGT GCTGGGACCC GTTGCCCAGA CTCGGCCGTC AGCGCCCGCC GCGCCCCGGT
GTGCACAACT CCGGCTGGGT GCAGAGCCCG GGCGCCCAGT ACCTCGGTGA CCCGCGCTAT
CGGCGCGTGC TGCGCGACTA CGTCACCGGC GTTCTGACCC AGTTCCGCGA CGACGAACGC
GTCCTCGGTT GGGATCTGTG GAACGAACCC GACAACCCCG CCAACCAGTA CCGGCAGGTC
GAACGCAAGG ACAAGATCGA GCGGGTGGCC GAACTGCTTC CTCAGGTGTT CGGGTGGGCC
CGTGAGGTGG ACCCCGTCCA GCCGCTGACC AGCGCGGTGT GGGACGGGGA GTGGGGCGAC
CCCGCGCGCC GCAGCACGAT CTGCCGCATC CAGTTGGACA ACTCCGATGT GATCACGTTC
CACAACTACG GGGATGCGGA CGAATTCGAC GCGCGGATCA CCGAACTGCG CCCGCTCGGG
CGGCCCATCG TGTGCACCGA GTACCTGGCC CGCGAATTCG GCAACACCGT CGAGGGGATC
CTGCCGCTGG CCAAACGACG CAATGTGGGC GCCTACAACT GGGGGCTGGT GATGGGCAAG
ACCCAGACCC ATCTGCCGTG GGACTCCTGG GACAAGCCGT ACACCTCGCC CCCGTCGGTG
TGGTTCCACG AACTCCTGCG CCCCGACGGG CAGCCGTACC GGGACAGCGA GGTCCGGACC
ATCCGGTGGT TGACGGGCCG CGTCGGACCC ACCTGA
 
Protein sequence
MSGAACDTET EVEAGDRTLT STPDVPEANP RRPFARRAAL KLPALLTASA AASALPRASA 
ASRRWSAARA HAWYQQQGWL VGANFITSNA VNQLEMFQAA TFDRRRIDTE LMLARRIGLN
TVRVFLHDQL WAQDRNGFQR RLAQFVAIAA RHDIRPLFVL FDSCWDPLPR LGRQRPPRPG
VHNSGWVQSP GAQYLGDPRY RRVLRDYVTG VLTQFRDDER VLGWDLWNEP DNPANQYRQV
ERKDKIERVA ELLPQVFGWA REVDPVQPLT SAVWDGEWGD PARRSTICRI QLDNSDVITF
HNYGDADEFD ARITELRPLG RPIVCTEYLA REFGNTVEGI LPLAKRRNVG AYNWGLVMGK
TQTHLPWDSW DKPYTSPPSV WFHELLRPDG QPYRDSEVRT IRWLTGRVGP T