Gene Mmcs_5266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_5266 
Symbol 
ID4114093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp5551688 
End bp5553862 
Gene Length2175 bp 
Protein Length724 aa 
Translation table11 
GC content70% 
IMG OID638034422 
Productputative helicase 
Protein accessionYP_642423 
Protein GI108802226 
COG category[R] General function prediction only 
COG ID[COG3973] Superfamily I DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGGGGT ACGAGGACGA ACTGCGCTCC GAACGCACCT ATGTGTCGGG GCTCTACACC 
CGGCTCGACG GGGAACGCGC GCGGGCCAAG GAGAAGTACG CCGCGGCGCT GCGCGGGGAC
GGCGCGCTCG TCGAACGCGA CGCCGAGGTG AGGGCCCTGG CCAAGGAGAT GCAGCGGCTC
GACGTGGCCG ACGACGGCCT GTGTTTCGGC CGACTGGACG CCGACTCCGG TGAGCGTCTC
TACATCGGCC GGATCGGGAT CTTCGACCGC GACAACGACT TCGAACCGCT GCTCCTCGAC
TGGCGGGCGC CGCTGTCTCG CGCTTTCTAC GTCGCCACCG CCGCGCACCC CGAGGGGATG
CGGCGGCGCC GCCAGTTCCG CACCCGCGGG CGGCAGATCC TCGACTTCAC CGACGAGGTC
TTCGGCAGGC CTCGCGGCGA CGAACGGGGC GGCGATTCGG CGCTGCTCGC CGCGGTGAAC
GCGCCTCGCG GTGAGGGTAT GCGCGACATC GTCGCGACGA TCCAGGCCGA GCAGGATGCG
ATCATCCGGC TCGACCACCC GGGGGTGCTG GTGATCGAGG GCGGGCCGGG GACCGGTAAG
ACCGTGGTGG CACTGCACCG GGTCGCCTAT CTGCTGTACA CGCAGCGCGC CCGCATCGAA
CGTCACGGCG TGCTGGTGAT CGGTCCGAAT CCGGCGTTCC TCGACCACAT CAGCCGTGTG
CTGCCGTCGC TGGGTGAGAC CAACGTCGTG CTCATGACGA CCGGCGATCT GGTGCCGGGC
ATTTCGGCCA CCGCCGAGGA CGACGCCGCC GACGTGAAGG GTTCGCTGAC GATGCTCGAC
GTGCTGGCGG CGGCGGTCGC TGACCGGCAA CGGGTGCCCG AACAGCCCCT GGTCATCGAG
CTGCCGGACG TCACCGTGCA GATCGACCCC GACACCGCCC AGTGGGCGAT CGAAGAGGCT
CGCGGCAGCG GACTGCCACA CAACCACGCG CGCAAGGTCT TTCGCGAGAC GGTCGAATGG
GTGCTCACCG AACGGGCGGT GTCCCGAATC GGTCGGGGCT GGTTGTCGCG CGCGGACAAG
GGGGCTTGGG AGGAGCTGCG CGCCGATGTC CTCGAAGACC TCGCCGACAG CGAGCAGTAC
CTCGCGGCGC TCGACGAGTT GTGGCCGGTG CTCACCCCGC AGACCCTGCT GGCCGATCTG
TACGAGTCCC GGGAACGTTT GCGTGCGGCG GGCGCCGACG AAAGGCTGTG GCGCTCCGAC
GGTGCCGCGT GGACGGTGTC GGACGTGCCG TTGCTCGACG AACTCGTCGA CCTGCTGGGC
CGCGACATGG CGGCCGACAT CGCCGCCGCG AAGGAACGCG AGGCCGAGAC CGATTACGCC
GAGGGCGTCC TCGAATCGAT GGTCGCCCAC GAGGATCTGA TGGACGACGA AGACCTGCTG
CTCGCGACCG ACCTGTTGCA CGGCGAGGAG CTGGCCGAAC GCTTCACCGA ACGCGACAAC
CGCGAGCTGG CCGAACGCGC TGCCGCGGAT CGTGATTGGA CCTATCGGCA CGTCGTGGTC
GACGAGGCAC AGGAACTGTC GGCGATGGAC TGGCGGGTGC TGATGCGGCG CTGCCCGAGC
AAATCGTTCA CCATCGTGGG CGATCTCGCG CAGCGCCGCT CGGCCGCAGG CGCCCGGTCC
TGGGGGGCGA TGCTCGACAC GTACGTACCC GGCCGCTGGG TCTACCGCCC CCTGTCGGTC
AACTACCGCA CCCCCGCGGA GATCATGGCG GTCGCGGCCG CGGTACTCGC CGAGTTCGCA
CCCGACGTCA CACCGCCCGA GTCGGTGCGG TCGACGGGGG TGCAGCCGTG GCGCCGACAG
GTGACTCCGG ACGAATTGCC CTCGGCGATC GGCGAATTCG TGGACGACGA ATCCGGACGC
GAAGGCACCA GTGTCGCGAT CGGTCCACCG GATGTGCCGG GGACGGTGGC GCCGAGCGAG
GTCAAGGGTC TGGAGTTCGA CGCCGTCCTC GTGGTCGAGC CGGAGCGGAT CTTCGACGGT
CCCCGGGGCG CGGCCGAACT CTACGTCGCC CTCACCCGCG CCACCCAGCG CCTCGGCATC
GCGCACTGCG GGCCCCTTCC GCCTGCGCTG GCGGCACTGG TCGATATCCC CGTCGATCGG
GAAGCCGCGC GTTAG
 
Protein sequence
MPGYEDELRS ERTYVSGLYT RLDGERARAK EKYAAALRGD GALVERDAEV RALAKEMQRL 
DVADDGLCFG RLDADSGERL YIGRIGIFDR DNDFEPLLLD WRAPLSRAFY VATAAHPEGM
RRRRQFRTRG RQILDFTDEV FGRPRGDERG GDSALLAAVN APRGEGMRDI VATIQAEQDA
IIRLDHPGVL VIEGGPGTGK TVVALHRVAY LLYTQRARIE RHGVLVIGPN PAFLDHISRV
LPSLGETNVV LMTTGDLVPG ISATAEDDAA DVKGSLTMLD VLAAAVADRQ RVPEQPLVIE
LPDVTVQIDP DTAQWAIEEA RGSGLPHNHA RKVFRETVEW VLTERAVSRI GRGWLSRADK
GAWEELRADV LEDLADSEQY LAALDELWPV LTPQTLLADL YESRERLRAA GADERLWRSD
GAAWTVSDVP LLDELVDLLG RDMAADIAAA KEREAETDYA EGVLESMVAH EDLMDDEDLL
LATDLLHGEE LAERFTERDN RELAERAAAD RDWTYRHVVV DEAQELSAMD WRVLMRRCPS
KSFTIVGDLA QRRSAAGARS WGAMLDTYVP GRWVYRPLSV NYRTPAEIMA VAAAVLAEFA
PDVTPPESVR STGVQPWRRQ VTPDELPSAI GEFVDDESGR EGTSVAIGPP DVPGTVAPSE
VKGLEFDAVL VVEPERIFDG PRGAAELYVA LTRATQRLGI AHCGPLPPAL AALVDIPVDR
EAAR