| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_5190 |
|---|
| Symbol | |
|---|
| ID | 4114019 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 5476778 |
|---|
| End bp | 5478058 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638034348 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_642350 |
|---|
| Protein GI | 108802153 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0807] GTP cyclohydrolase II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.150921 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGCGC CTTTCCCCCT GAGGACGGGA GGCGCCATGT CGACTGGGAG CGGACACATC
CGGTTGACGT CGCACAGCGG TGCGGTGGGC ACCCCGACGA TCCACTGGGG TGCGCCCACC
GCCGCCGAGC GCGGGCCGGT GATCGGGACG ACCGCCAACC GCTCGCACCG CAACGTCATC
GGCACCCACA GCGGGTCCTA CAGCGTCTAC CGGGCACTGG CCGTCGCCGC GGGTGCGCTC
AAACGGGAGC ACCGCGCCGA CCTCACCGAC ACCTCGCCGA CCGACACCAT CGGCCCATAC
CCGCAGTGGG GTGAACCGGC CACGATCGTC AGCATGGACC CGTGGGGCGC CAGTGTGGCC
GACGTGTTCA CCGCCGAACT CGCTGCGGGC CTCGACATCC GGCCGACCAT CGCGATCACC
AAGGCGCATG TGATCCTGCC CGAGATCACC GACGCGATCG CCAAGGGCCG CCTGGTCCCC
GACGGGCGCG TCCTGCTCGC CAGCGGCGCC GCGCTGGTCA CTAAGGCCGC CGTCGAACCC
GTCTGGTGGC TGCCCGGGGT GGCGCAGCGG TTCGGGTGCA GCGAGACTGA TCTGCGCCGG
GTGCTGTTCG AGGAGACCGG CGGGATGTAC CCGGAACTCG TCACCCGCTC CGACCTCGAG
GTGTTCCTCC CGCCGATCGG CGGGCAGACC GTCTACATCT TCGGCAGCGC AACCGATCTC
GCCGATCCGT CGGTCGAGTT GACCGCCCGC GTACACGACG AGTGCAACGG CTCGGACGTC
TTCGGGTCCG ACATCTGCAC GTGCAGGCCG TATCTCACGC ATGCGATCGA GGAGTGCATC
CGCGGCGCCC AGAACGGTGG CGTCGGCCTG GTCGCCTACT CCCGCAAGGA GGGCCGCGCG
CTGGGTGAGG TCACCAAGTT CCTGGTGTAC AACGCCCGCA AGCGTCAGGT CGGCGGCGAC
ACCGCCGATC AGTACTTCGC GCGCACCGAA TGTGTGGCCG GCGTCCAGGA CATGCGCTTC
CAGGAACTGA TGCCCGACGT GCTGCACTGG TTCGGTATCC GCAAGATCCA CCGCCTGGTG
TCGATGAGCA ACATGAAGTA CGACGCGATC ACCGGGTCGG GAATCGAAGT GGGAGAACGG
GTCAACATCC CCGAGGAACT CATCCCTCCG GATGCGCGGG TGGAGATCGA CGCCAAGATG
GCGGCCGGTT ACTTCACCCC GGGCCCGGTG CCCGACGCCG AGAAACTCAA GCAGGTCAAG
GGTCGCGGGT TGTCGCAGTG A
|
|---|
| Protein sequence | MLAPFPLRTG GAMSTGSGHI RLTSHSGAVG TPTIHWGAPT AAERGPVIGT TANRSHRNVI
GTHSGSYSVY RALAVAAGAL KREHRADLTD TSPTDTIGPY PQWGEPATIV SMDPWGASVA
DVFTAELAAG LDIRPTIAIT KAHVILPEIT DAIAKGRLVP DGRVLLASGA ALVTKAAVEP
VWWLPGVAQR FGCSETDLRR VLFEETGGMY PELVTRSDLE VFLPPIGGQT VYIFGSATDL
ADPSVELTAR VHDECNGSDV FGSDICTCRP YLTHAIEECI RGAQNGGVGL VAYSRKEGRA
LGEVTKFLVY NARKRQVGGD TADQYFARTE CVAGVQDMRF QELMPDVLHW FGIRKIHRLV
SMSNMKYDAI TGSGIEVGER VNIPEELIPP DARVEIDAKM AAGYFTPGPV PDAEKLKQVK
GRGLSQ
|
|---|
| |