| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_5169 |
|---|
| Symbol | |
|---|
| ID | 4113998 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 5457201 |
|---|
| End bp | 5458046 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638034327 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_642329 |
|---|
| Protein GI | 108802132 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCACTC TCACGTTGCC GACCGCAACC ATCAACTACC GCGTCGCCGG TCCGGAGAAC
TCGCAGTTCC CGCCGGTGGT GTTCGTCCAC GGTGCGCTCG TCGACCACCG GCTGTGGGAT
CCCGTGGCAG ATATTCTGTC GGCCAAAGGT TTTCGCTGCG TGCTACCCGA CTGGCCGTTG
GGGTCGCACC GCATCCCGGT CGACTCCGAA CTGTCGCCGA CAAGTGTGGC CGCAATGGTC
CATGACCTCC TCACGACGCT CGGGCTGGAT GACGTCACGC TGGTCGGCAA CGACACCGGC
GGCGCAATCT GCCAATTGGT GGTCGACGCA TACCCGGACC TGATCGGCCG CCTGGTCCTC
ACGAATTGCG ATGCCTTCGA CAAGTTCCCA CCCTTCCCGT TCAACGTGGT CTTCGCGATG
TTGCGCGGCC AGGTGTCGAT CAAGGTGCTG ACCGAGCTGA TGCGGGTCCG CGTGTTGCGC
CAGTCGCCTC TCGGGTTCGG GTTGCTGAGC CGGCCGCATC CCGAGCTCAC CGCGTCGTGG
CTGGAGCCCT GCAGGACGGA CGCCGGTGTG CGCGCGAATC TGGCGACGCT GCTGAGGCAC
ATCGCCGCAA CGGATCTCAC CGTCGTCGCG GACCGGCTAC CGCAATTCAC CAAGCCGGTG
CGGCTGGTGT GGGGTATGCG GGACCGCTGC TTCACTCCGG CGCTGGGCCG TCGGCTGACA
GGTCAGTTCC CCGACGCGAC GATGGTCGAG GTGCCGGACG CGAGCACGTT CGTCGCCCTG
GACGCGCCGC ACGCGGTCGC CGATGCGGTG GAAGCGCTGT CACGGAGTGC GACCGGCGCT
CAGTAG
|
|---|
| Protein sequence | MPTLTLPTAT INYRVAGPEN SQFPPVVFVH GALVDHRLWD PVADILSAKG FRCVLPDWPL
GSHRIPVDSE LSPTSVAAMV HDLLTTLGLD DVTLVGNDTG GAICQLVVDA YPDLIGRLVL
TNCDAFDKFP PFPFNVVFAM LRGQVSIKVL TELMRVRVLR QSPLGFGLLS RPHPELTASW
LEPCRTDAGV RANLATLLRH IAATDLTVVA DRLPQFTKPV RLVWGMRDRC FTPALGRRLT
GQFPDATMVE VPDASTFVAL DAPHAVADAV EALSRSATGA Q
|
|---|
| |