Gene Mmcs_5157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_5157 
Symbol 
ID4113986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp5447237 
End bp5447584 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content66% 
IMG OID638034315 
Productanti-sigma-factor antagonist 
Protein accessionYP_642317 
Protein GI108802120 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.861722 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGACGGTC AGAACTTCGG TGTCGAACAG TGGCACGGCC GCGTCGCCGT GATCCGCGCC 
ACCGGTGCCG TCGACATGTT GACCGCACCA CACCTGGAGA TCGCGATCCG CGCGGCCCGC
GAGAAGAGGC CGACCGGCCT GATCGTCGAT CTGAGCGATG CGGAGTTCCT GTCCTCGGCC
GGGATGCAGG TGCTGGTCAC CACCCATGAG GAGCTCACCC CCGGTGCCCG GTTCGCGGTG
GTGGCCGAGG GACCGGGCAC CAGCCGACCG TTGAAGATCA CCGGACTGAC CGACTTCATC
GAGCTGTTCT CGACGCTGGA TGCGGCGCTG AACACATTTG CTGAATGA
 
Protein sequence
MDGQNFGVEQ WHGRVAVIRA TGAVDMLTAP HLEIAIRAAR EKRPTGLIVD LSDAEFLSSA 
GMQVLVTTHE ELTPGARFAV VAEGPGTSRP LKITGLTDFI ELFSTLDAAL NTFAE