| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_5089 |
|---|
| Symbol | |
|---|
| ID | 4113918 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | - |
|---|
| Start bp | 5386568 |
|---|
| End bp | 5387578 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638034247 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_642249 |
|---|
| Protein GI | 108802052 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCG CACTGGTCAT CGGGGCCAAC GGGTTCCTCG GCTCGCACGT CACCCGTCAG
CTGGTCGACG GTGGCCACGA GGTCCGGGCG ATGGTGCGCC CGAACGCGAA GACGGTAGGC
ATCGACGACC TGGACGTCAC CCGCTTCGTC GGCGACATCT GGGACGACGC CACCCTGCGC
GAGGCGATGA CCGGGTGCGA CGACGTGTAC TACTGCGTGG TCGACGCCCG CGGGTGGCTA
CGCGACCCCG CCCCGCTGTT CCGCACCAAC GTCGAGGGCA CCCGCAACGT GCTGGACGTG
GCCCGGGACA TGCCGCTGCG CCGATTCGTG TTCACCAGCA GCTACGTCAC CGTCGGACGC
CGCCGCGGGC GACGGTCCAC CGAGGACGAC GTCGCCGATG TCCGCCGGGT GACCCCGTAC
GTCCGGTCAC GAATCGAGGG CGAGGAGTTG GTGCTGAGCA ACGCGCGGGA GCGCGGTCTG
CCCGCCGTCG CGATGTGTGT GTCGACGACC TACGGCAGCG GTGACTGGGG GCGCACCCCG
CACGGCGCGA TCATCGCCGC CGCCGCCTTC GGCAAGCTGC CGTTCGTGAT GAGCGGTATC
GAACTCGAAG CGGTCGGGAT CGACGACGCG GCACGCGCGC TCATCCTGGC CGCCGAGAAG
GGCCGGGCCG GTGAGCGGTA CCTGATCTCG GAGAAGATGA TCAGCAACGC CGAGGTGGCA
CGCATCGCTG CCGAGGCCGC GGGCGTGGCG CCGCCGGCGA AGTCGATCCC CCTGCCGGTG
TCGTACGTGC TCGCGACGCT GGGCAGCGTC AAGTCGCGGT TACGGGGCAC CGACGAGCGG
TTGTCGCTGG AATCGCTGCG GCTGATGCGG GCCGAAGCCG AACTCGACCA CAGCAAGGCC
GTGCGCGAAC TGGGCTGGCA ACCGGGGCCG GTCGAGGAGT CGATCCGTGA GGCCGCGCGG
TTCTGGGTGA ACCTGCGTAA TGTCAGGCGG GAGAGTAAAA CCCAGGCGTA G
|
|---|
| Protein sequence | MSTALVIGAN GFLGSHVTRQ LVDGGHEVRA MVRPNAKTVG IDDLDVTRFV GDIWDDATLR
EAMTGCDDVY YCVVDARGWL RDPAPLFRTN VEGTRNVLDV ARDMPLRRFV FTSSYVTVGR
RRGRRSTEDD VADVRRVTPY VRSRIEGEEL VLSNARERGL PAVAMCVSTT YGSGDWGRTP
HGAIIAAAAF GKLPFVMSGI ELEAVGIDDA ARALILAAEK GRAGERYLIS EKMISNAEVA
RIAAEAAGVA PPAKSIPLPV SYVLATLGSV KSRLRGTDER LSLESLRLMR AEAELDHSKA
VRELGWQPGP VEESIREAAR FWVNLRNVRR ESKTQA
|
|---|
| |