Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_5066 |
Symbol | |
ID | 4113895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | - |
Start bp | 5362981 |
End bp | 5367564 |
Gene Length | 4584 bp |
Protein Length | 1527 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638034224 |
Product | glutamate synthase (NADH) large subunit |
Protein accession | YP_642226 |
Protein GI | 108802029 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0069] Glutamate synthase domain 2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGACCAG TGCCCAGCGG GCTGTACAAC CCCGCGTACG AGCACGACTC GTGTGGCGTG GCGATGGTGG CCGATATGCA CGGGCGCCGC AGCCGCGACA TCGTCGACAA GGCCATCACG GCCCTGCTCA ACCTGGAGCA CCGCGGTGCC CAGGGCGCCG AACCGAACAC CGGCGACGGT GCGGGAATCC TGCTGCAGGT CCCCGACGAG TTCTTCCGGG CCGTGGTGGA CTTCGACCTG CCCGAGCCGG GCAGCTACGC CACCGGCATC GCGTTCCTGC CGCAGTCGTC CAAGGACGCA GCGACGGCCT GCGAGCAGGT CCAGAAAATC GCCGAGGCCG AGGGGCTGAC GGTGCTCGGC TGGCGCGACG TGCCGACCGA CGACTCCTCG CTGGGCGCCC TGGCCCGCGA CGCGATGCCG ACGTTCCGGC AGGTCTTCAT GGCCGGCGCC AGCGGTATGG ACCTGGAGCG CCGGGCCTAC GTCGTGCGCA AGCGCGCCGA GCACGAGCTG GGCACCAAGG GCCCGGGTCA GGACGGTCCG GGCCGGGAGA CGGTGTACTT CCCGAGCCTG AGCGGTCAGA CATTCGTCTA CAAGGGGATG CTGACCACCC CGCAGCTGCG GGCGTTCTAT CTCGACCTGC AGGACGAGCG GCTGACCAGC GCGCTGGGCA TCGTGCACTC CCGCTTCTCC ACCAACACCT TCCCCTCGTG GCCGCTGGCG CATCCGTTCC GCCGCGTCGC CCACAACGGT GAGATCAACA CCGTCACCGG TAACGAGAAC TGGATGCGGG CGCGCGAGGC GCTGATCCGC ACCGACGTCT TCGGCACCCA GGCCGACCTC GACAAGATCG TTCCCGTCTG CACGCCGGGC GCATCGGACA CCGCGCGCTT CGACGAGGTG CTCGAACTGC TGCACCTCGG GGGCCGCAGC CTGCCGCACG CGGTGCTGAT GATGATCCCC GAGGCGTGGG AACGCCACGA GTCGATGGAC CCGGCGCGAC GGGACTTCTA CCGCTACCAC GCCTCGCTCA TGGAACCGTG GGACGGCCCG GCGGCGGTGT GCTTCACCGA CGGCACCGTG ATCGGCGCCG TGCTCGACCG CAACGGTCTG CGCCCGTCGC GGATCTGGGT CACCGAGGAC GGCCTGGTCG TCATGGCATC GGAGGCCGGG GTACTCGACC TCGACCCGTC GACCGTCGTG CAGAAGATGC GTCTGCAGCC CGGCCGCATG TTCCTCGTCG ACACCGCGCA GGGCCGCATC GTCTCCGACG AGGAGATCAA GGCCGAACTC GCCGCCGAAC ACCCGTACGG CGAATGGCTC GAGGCCGGCC TGTTCCAGCT CGAGGAGTTG CCGCCGGGTG ACTACGTGCG GATGCCGCAC CACCGGGTGG TGCTGCGCCA GCAGGCGTTC GGCTACACCT ACGAAGAGCT CAACCTGCTC GTCGCCCCGA TGGCGCGCAC CGGCGCCGAG CCGATCGGGT CGATGGGCAC CGATACGCCC GTCGCCGTGC TCTCGCAGCG GCCGCGCATG CTGTTCGACT ACTTCCAGCA GTTGTTCGCG CAGGTGACCA ACCCGCCGCT GGACGCCATC CGCGAAGAGG TGGTGACCAG CCTGCAGGGC GTCATCGGTC CGGAGGGCGA TCTGCTCAAC CCGACCGCCG AATCGTGCCG TCAGATCGTG CTGCCGCAGC CGATCCTGCG CAACGCCGAA CTGTCGAAGC TGATCTGCGT CGACCCCGAC CACGAGATCC GCGGCCACAA GCACGGGATG CGCGCGGCGG TGATCCGCTG CCTGTACCCG GTCAACCGGG GCGGTCAGGG GCTGAAGGAG GCGCTGAACA ACGTCCGCGC CAAGGTCTCG GCCGCCATCC GCGACGGCGC GCGCATCATC GTGCTCTCCG ACCGCGAGTC CGACGAGCAG ATGGCGCCGA TCCCGTCGCT GCTGAGCGTC TCGGCGGTGC ACCACCACCT GGTCCGGGAG CGCACCCGCA CCCAGGTCGG GCTCGTCGTC GAGGCCGGCG ACGCCCGCGA GGTGCACCAC ATGGCCGCCC TGTGCGGTTT CGGCGCCGCG GCCATCAACC CCTACATGGC GTTCGAGTCG ATCGAGGACA TGGTCGACCG CGGCGTCATC ACCGGGATCT CCAGCGACCA GGCCAAGGCC AACTACGTCA AGGCCGCGGG CAAGGGTGTG CTGAAGGTGA TGTCCAAGAT GGGCATCTCG ACGCTGGCCT CCTACACCGG CGCGCAGCTG TTCCAGGCCA TCGGCATCGA CCAGAAGGTG CTCGACGAGT ACTTCACCGG GTTGAACTGC CCGGTCGGCG GTATCGACCT CGACGACATC GCCGCCGAGG TCGCCGCCCG CCACGCGCTG GCCTACCTCG ACCGGCCCGA CGAGCGGGCG CACCGCGAAC TCGAGGTCGG CGGTGAATAC CAGTGGCGGC GGGAAGGGGA GTACCACCTC TTCAACCCGG ACACGGTGTT CAAGCTGCAG CACTCCACCC GGACCGGCCA GTACTCGGTG TTCAAGGAGT ACACCCAGCT CGTTGACGAC CAGTCCGAGC GGATGGCCTC GCTGCGCGGC TTGCTGAAAT TCAAAGACGG TGTCCGTCAA CCGATTCCGA TCGACGAGGT AGAACCCGCC AGCGAGATCG TCAAACGCTT CTCCACCGGC GCGATGAGCT ACGGCTCGAT CTCGGCCGAG GCGCACGAGA CGCTCGCGAT CGCGATGAAC CGCCTCGGCG GGCGGTCCAA CTCGGGCGAG GGCGGCGAGG CCGTCACCCG CTTCGACCGC GACGACAACG GCGACTGGCG GCGCAGCGCG ATCAAGCAGG TCGCGTCGGG CCGTTTCGGG GTCACCAGCC ACTACCTGAG CAACTGCACC GACATCCAGA TCAAGATGGC CCAGGGTGCG AAACCCGGTG AGGGCGGGCA GCTTCCGGGT CACAAAGTGT ACCCGTGGGT CGCCGAGGTG CGGCACTCCA CACCGGGTGT GGGGCTGATC TCGCCGCCGC CGCACCACGA CATCTACTCG ATCGAGGATC TCGCGCAGCT GATCCACGAC CTCAAGAACG CCAACCCGCA GGCCCGCGTG CACGTGAAGC TGGTCAGCGA GAACGGCGTC GGGACGGTCG CGGCGGGGGT CTCCAAGGCC CACGCCGACG TGGTGCTGAT CTCCGGCCAC GACGGCGGCA CCGGCGCGAC CCCGCTGACG TCGATGAAGC ACGCGGGCGC GCCGTGGGAG CTGGGCCTGG CCGAGACTCA GCAGACGTTG CTGCTCAACG GTCTTCGCGA CCGCATCGTG GTGCAGGTCG ACGGTCAGCT CAAGACCGGC CGCGACGTGG TGATCGCCGC GCTGCTCGGC GCCGAGGAGT TCGGTTTCGC GACCGCACCG CTGGTGGTCT CGGGTTGCAT CATGATGCGG GTCTGCCACC TCGACACCTG TCCCGTCGGC GTGGCCACCC AGAACCCGGT GCTGCGCGAG CGGTTCAACG GTAAGCCCGA GTTCGTCGAG AACTTCTTCA TGTTCATCGC CGAGGAAGTG CGCGAGACCA TGGCGCAGTT GGGTTTCCGC ACCGTCAACG AGATGGTCGG CCAGGTCGGC GTGCTCGACA CCACGGAGGC GGCCGAGCAC TGGAAGGCGC ACAAGCTCGA CCTGTCGCCG GTGCTGCACG AGCCCGAGTC GGCGTTCATG AACCAGGACC TGTACTGCAG TTCGCGTCAG GACCACGGGC TGGACAAGGC GCTCGACCAG CAGCTGATCG TGATGTGCCG CGAGGCACTG GATGCCGGCA CGCCGGTCAA GTTCTCGACC ACCATCGCCA ACGTCAACCG CACGGTCGGC ACCATGCTCG GCCACGAGGT GACCAAGGCG TACGGCGGCC AGGGACTCCC GGACGGCACG ATCGACATCA CGTTCGACGG TTCGGCCGGC AACAGCTTCG GCGCCTTTGT CCCCCAGGGC ATCACTCTGC GGGTCTACGG CGATGCGAAC GACTATGTGG GCAAGGGTCT CTCGGGTGGC CGGGTGGTGG TCCGTCCGGC GGAGAACGCC CCGGCCGACT ACGTGGCCGA GGACAACATC ATCGCAGGCA ACGTCATCCT GTTCGGGGCG ACCAGCGGTG AGATGTTCCT GCGCGGCCAG GTCGGGGAGC GCTTCGCGGT CCGCAACTCC GGGGCCGTCG CCGTCGTCGA GGGTGTGGGC GACCACGGTT GCGAGTACAT GACCGGCGGC AAGGTCGTCA TCCTCGGCCC GACCGGCCGC AACTTCGCGG CCGGGATGTC CGGCGGGATG GCGTTCGTCT ACGACCCCGC GGGTGAACTC CCGGACAACC TCAACGCCGA GATGGTGGAG CTCGACGCTC TCGACGACGA GAACGTCTCG TGGCTGCACG GCATGCTGCA GGCTCACGTC AACGCCACGG ATTCGGCTGT GGGACAACGC ATCCTGAACA ACTGGGAAGA AGAGTTGAAG CATTTCGTCA AGGTCATGCC GCGCGATTTC AAGCGCGTGC TGGCCGCAAT CGCCGAGGCG GAACGCACCG GCGCCGACAA GAACGAGGCG ATCATGGCGG CCGCAAGTGG CTGA
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Protein sequence | MGPVPSGLYN PAYEHDSCGV AMVADMHGRR SRDIVDKAIT ALLNLEHRGA QGAEPNTGDG AGILLQVPDE FFRAVVDFDL PEPGSYATGI AFLPQSSKDA ATACEQVQKI AEAEGLTVLG WRDVPTDDSS LGALARDAMP TFRQVFMAGA SGMDLERRAY VVRKRAEHEL GTKGPGQDGP GRETVYFPSL SGQTFVYKGM LTTPQLRAFY LDLQDERLTS ALGIVHSRFS TNTFPSWPLA HPFRRVAHNG EINTVTGNEN WMRAREALIR TDVFGTQADL DKIVPVCTPG ASDTARFDEV LELLHLGGRS LPHAVLMMIP EAWERHESMD PARRDFYRYH ASLMEPWDGP AAVCFTDGTV IGAVLDRNGL RPSRIWVTED GLVVMASEAG VLDLDPSTVV QKMRLQPGRM FLVDTAQGRI VSDEEIKAEL AAEHPYGEWL EAGLFQLEEL PPGDYVRMPH HRVVLRQQAF GYTYEELNLL VAPMARTGAE PIGSMGTDTP VAVLSQRPRM LFDYFQQLFA QVTNPPLDAI REEVVTSLQG VIGPEGDLLN PTAESCRQIV LPQPILRNAE LSKLICVDPD HEIRGHKHGM RAAVIRCLYP VNRGGQGLKE ALNNVRAKVS AAIRDGARII VLSDRESDEQ MAPIPSLLSV SAVHHHLVRE RTRTQVGLVV EAGDAREVHH MAALCGFGAA AINPYMAFES IEDMVDRGVI TGISSDQAKA NYVKAAGKGV LKVMSKMGIS TLASYTGAQL FQAIGIDQKV LDEYFTGLNC PVGGIDLDDI AAEVAARHAL AYLDRPDERA HRELEVGGEY QWRREGEYHL FNPDTVFKLQ HSTRTGQYSV FKEYTQLVDD QSERMASLRG LLKFKDGVRQ PIPIDEVEPA SEIVKRFSTG AMSYGSISAE AHETLAIAMN RLGGRSNSGE GGEAVTRFDR DDNGDWRRSA IKQVASGRFG VTSHYLSNCT DIQIKMAQGA KPGEGGQLPG HKVYPWVAEV RHSTPGVGLI SPPPHHDIYS IEDLAQLIHD LKNANPQARV HVKLVSENGV GTVAAGVSKA HADVVLISGH DGGTGATPLT SMKHAGAPWE LGLAETQQTL LLNGLRDRIV VQVDGQLKTG RDVVIAALLG AEEFGFATAP LVVSGCIMMR VCHLDTCPVG VATQNPVLRE RFNGKPEFVE NFFMFIAEEV RETMAQLGFR TVNEMVGQVG VLDTTEAAEH WKAHKLDLSP VLHEPESAFM NQDLYCSSRQ DHGLDKALDQ QLIVMCREAL DAGTPVKFST TIANVNRTVG TMLGHEVTKA YGGQGLPDGT IDITFDGSAG NSFGAFVPQG ITLRVYGDAN DYVGKGLSGG RVVVRPAENA PADYVAEDNI IAGNVILFGA TSGEMFLRGQ VGERFAVRNS GAVAVVEGVG DHGCEYMTGG KVVILGPTGR NFAAGMSGGM AFVYDPAGEL PDNLNAEMVE LDALDDENVS WLHGMLQAHV NATDSAVGQR ILNNWEEELK HFVKVMPRDF KRVLAAIAEA ERTGADKNEA IMAAASG
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