Gene Mmcs_5058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_5058 
Symbol 
ID4113887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand+ 
Start bp5354270 
End bp5354935 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content70% 
IMG OID638034216 
ProductTetR family transcriptional regulator 
Protein accessionYP_642218 
Protein GI108802021 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.519107 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTGAGAA TTTCGACGGC GTGTAAAGTA TCCGGCGTGA CCACCGCCAG CCAGGCCCGC 
GCCCCCCGTG GCCGCCGGTC GGCCCGCCCG TCGGGCGACG ACCGCGAACA GGCCATCCTG 
GCGACCGCCG AACAACTCCT CGAGGCCCGC CCGTTCGCCG AGATCTCCGT CGACGACCTG 
GCCAAGGGCG CGGGCATCTC CCGCCCCACC TTCTACTTCT ACTTCGGCTC CAAGGAAGCG 
GTGCTGCTGA CGCTGTGGGA GCGGGTCATC CGGGAGGCCG ATGCGGCACT CGAGAACGCC 
GCCTCCAACG CGACGTCGGA GGACGTGTGG CGGCCGGGCA TCAAGGTGTT CTTCGATACG 
TTCGGCGCCC ACCGGGGCGT CACCGTCGCG GCATCCGGAT CCGACAACGC CGAGGTCCGC 
GACGTCTTCG CGAGGTTCAT GCAGAAGTGG ATCGATTTCA CCGCAGCGAC CATCGAGGCC 
GAACGCCGGC GCGGCGCGGC CCCGCAGACG CTGCCCGCCC GCGACATCGC CACCGCGCTC 
AACCTGATGA ACGAGCGCAC CCTGCTCGCG GCGTTCGCCG CCGAGACACC CGGCATCCCG 
CCCGACCGGG TCCTCGACTC GCTCGTGCAC GTGTGGACGT GTGCGGTGTA CGGGGAATGC 
CGCTGA
 
Protein sequence
MLRISTACKV SGVTTASQAR APRGRRSARP SGDDREQAIL ATAEQLLEAR PFAEISVDDL 
AKGAGISRPT FYFYFGSKEA VLLTLWERVI READAALENA ASNATSEDVW RPGIKVFFDT 
FGAHRGVTVA ASGSDNAEVR DVFARFMQKW IDFTAATIEA ERRRGAAPQT LPARDIATAL 
NLMNERTLLA AFAAETPGIP PDRVLDSLVH VWTCAVYGEC R