Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_4942 |
Symbol | |
ID | 4113771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 5232510 |
End bp | 5233979 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638034096 |
Product | amino acid ABC transporter permease |
Protein accession | YP_642102 |
Protein GI | 108801905 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0765] ABC-type amino acid transport system, permease component [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGGTTTC TTCGGGCGCT CCTGCTGCTG CTCGCCGTCC TGACCGTGGC GTCCTGCGCA TCGGCGGATG ACGGCAGCGA CGAGCCGATC AAGTCGGCGG GCGTGCTGCG GGTCGGCACC GAGGGGGTGT ACGCCCCGTT CAGCTATCAC GACGCCTCCG GTCAACTGGT CGGCTACGAC GTCGACGTGG CGCGCGCGGT GGCCGACAAG ATCGGAGTGC GCGCCGAGTT CGTGGAGACG CCGTGGGACG CGATGTTCGC CGCCCTGGAG GCGGGCCGGT TCGACGTGGT CGCCAACGAG GTGACCATCA ACGCCGAGCG GCGGGCGAAA TACGACCTGT CACAACCGTA TTCGGTGGGC GAGGGAGTGA TCGTCACCCG CGCCGACGAC GATTCGATCA CCACGCTCGA CGATCTCGCG GGCAAGGTCG CCGCCGAGAA CGCGACCAGC AACTGGTCGG AGGTCGCGCG TGAGGCCGGG GCGCGGGTGG AGGCCGTGGA GGGTTTCACC CAGGCCATCA CGCTGCTCAA TCAGGGCCGG GTCGACGTCG TCGTCAACGA CAGCATCGCG GTGTACGCCT ACCTCGCCGA AACGGGCGAC ACCTCGGTGA AGATCGCGGG CACGGTCGGT GAGAAGAGCG AACAGGGCTT CGCCGCCCGC AAGGACAGCG GCCTGCTGCC CGAACTCAAC CGGGCACTCG ACGAACTGCG CGCCGACGGC ACGCTTGCCG AGATCTCCCA GCGGTACCTC AAGGCCAACG CCTCAGGTGC GCCGGAGTCC GATCAAGCGG ACACCGCGGG CGCTCCCCGT TCCACGTGGC AGCTGATCCT CGACAACCTG TGGCCGCTCG CGCGGGCGGC GCTGACGATG ACGATCCCGC TGACAGTCAT CAGCTTCGCT ATCGGTCTGG TGATCGCGCT CGGGGTCGCG CTGGCCCGGT TGTCGCCGAA TGTGGTGCTG ACCAACGTCG CCCGCTTCTA TATCTCGATC ATCCGCGGCA CCCCACTGCT CGTGCAGTTG TTCATCGTGT TCTTCGCGCT GCCGGAGTTC GGGATCCGGA TCGACCCGTT CCCGGCGGCG GTGATCGCGT TCTCGCTCAA CGTCGGCGGG TACGCCGCCG AGATCATCCG CTCGGCGATC CTGTCCATCC CGAAGGGTCA GTGGGAGGCC GCCGAGACGA TCGGCATGAA CTACCCGACG TCGCTGCGCC GCATCGTGCT GCCGCAGGCC GCCCGGGTGG CCGTACCGCC GCTGTCGAAC ACGCTGATCT CCCTGGTCAA GGACACCTCA CTGGCGTCGA CCATCCTGGT GACCGAACTG CTGCGGCAGG CGCAGATCGT CGCGGCCCCG ACGTTCGAGT TCTTCGCGCT GTACGGCACC GCCGCGGTGT ACTACTGGGT GATCTGCCTG GTGTTGTCGT TCGGTCAGGG CCGCATCGAG CGCCGGCTGG AAAGGTACGT GGCGAGATGA
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Protein sequence | MRFLRALLLL LAVLTVASCA SADDGSDEPI KSAGVLRVGT EGVYAPFSYH DASGQLVGYD VDVARAVADK IGVRAEFVET PWDAMFAALE AGRFDVVANE VTINAERRAK YDLSQPYSVG EGVIVTRADD DSITTLDDLA GKVAAENATS NWSEVAREAG ARVEAVEGFT QAITLLNQGR VDVVVNDSIA VYAYLAETGD TSVKIAGTVG EKSEQGFAAR KDSGLLPELN RALDELRADG TLAEISQRYL KANASGAPES DQADTAGAPR STWQLILDNL WPLARAALTM TIPLTVISFA IGLVIALGVA LARLSPNVVL TNVARFYISI IRGTPLLVQL FIVFFALPEF GIRIDPFPAA VIAFSLNVGG YAAEIIRSAI LSIPKGQWEA AETIGMNYPT SLRRIVLPQA ARVAVPPLSN TLISLVKDTS LASTILVTEL LRQAQIVAAP TFEFFALYGT AAVYYWVICL VLSFGQGRIE RRLERYVAR
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