Gene Mmcs_4816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_4816 
Symbol 
ID4113645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp5100408 
End bp5101187 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content67% 
IMG OID638033968 
ProductDNA-(apurinic or apyrimidinic site) lyase / endonuclease III 
Protein accessionYP_641976 
Protein GI108801779 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.308298 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGCAG GTACGGCCGA CCCGAAGCCG GCGCGGCGTG CTGCCGCCAA GAAGTGGGAC 
AACGAGACGC AGCTGGGCCT GGTGCGGCGC GCGCGACGGA TGAATCGTGC TCTGGCCCAA
GCGTTTCCAC ACGTGTACTG CGAGCTCGAC TTCACCAATC CGCTCGAACT CGCGGTGGCC
ACCATTCTGT CCGCCCAGAG CACCGACAAG CGGGTCAACC TGACCACCCC CGCGTTGTTC
AAGAAGTACC GCACCGCACT CGACTACGCC CAGGCCGACC GCACCGAACT CGAGGAGTTG
ATCCGGCCCA CCGGTTTCTA CCGGAACAAG GCCAATTCGC TGATCCGGCT CGGCCAGGAA
CTCGTCGAAC GCTTCGACGG TCAGGTGCCC GCCGACATCG ACGACCTGGT GACGCTGCCG
GGGGTGGGCC GCAAAACGGC CAACGTCATC CTCGGCAACG CCTTCGAGGT CCCAGGAATC
ACCGTCGACA CCCACTTCGG CCGGTTGGTG CGCCGGTGGC GGTGGACCGC CGAAGAGGAT
CCGGTGAAGG TCGAGCATGC GATCGGCAAA CTCATCGAGC GCAGCGAATG GACCCTGCTG
AGCCATCGCG TGATCTTCCA CGGCCGCCGC GTATGCCACG CCCGCAAGCC GGCCTGTGGG
GTGTGCGTAC TGGCCAAGGA CTGCCCGTCG TTCGGCATCG GCCCGACCGA CCGCGAAGCC
GCCGCGGCGC TGGTCAAGGG GCCGGAGACC GAGCACCTAC TCGCCCTCGC GGGCCTGTAG
 
Protein sequence
MTAGTADPKP ARRAAAKKWD NETQLGLVRR ARRMNRALAQ AFPHVYCELD FTNPLELAVA 
TILSAQSTDK RVNLTTPALF KKYRTALDYA QADRTELEEL IRPTGFYRNK ANSLIRLGQE
LVERFDGQVP ADIDDLVTLP GVGRKTANVI LGNAFEVPGI TVDTHFGRLV RRWRWTAEED
PVKVEHAIGK LIERSEWTLL SHRVIFHGRR VCHARKPACG VCVLAKDCPS FGIGPTDREA
AAALVKGPET EHLLALAGL