Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_4752 |
Symbol | |
ID | 4113581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 5028628 |
End bp | 5029959 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638033903 |
Product | putative lipoprotein LpqF |
Protein accession | YP_641912 |
Protein GI | 108801715 |
COG category | [V] Defense mechanisms |
COG ID | [COG2367] Beta-lactamase class A |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.164946 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGCCGGG TGGCCGGCCT GGTGACTGCT GCCGCGCTCG TCGTCTCCTC AGTGTCCGGA TGCGGTCAGA CGAACACCGC TCCGGCCGAC GCCGCCTACG GCGCCCACAT CGGTACCAGC ACGCCACAGG GGCTGCGGGC CAAACAGACC ATGGACATGG TCAATTCGGA CTGGCCCATC GGCGACGTCA ACGTGCGCAC GATGGCCGTC GAGGACCAGG TCGACCACAT CATCGACGCC ATGGGCAATC TGTGGTGGGA CCGCCCGATA ACCGTCACCG GCGTGCACAT GGGCGCGGGC ACCGCCACGC TGCACGTCAA GACGCCGTAC GGCGCCGAAC AGGACATCGA GCTGCGCACC GACGACAACG GTCTGGTCGA CCGGTTCGAC GTATCCCTGC GCTCTCCGGT GATCGAGAAG TGGTCGGACA TCGACGCGGT GCTGGCCGCC TCCGGTGCGC GGTACTCCTA CCAGGTGTCG CGGGTCGCCG AGGGCGGCAA GTGTCAGCGG GTGGCGGGGA CCAACACCGA GATGTCGCTG CCGCTGGCGT CGATCTTCAA GCTCTACGTG CTGCTCGCGG TGGCCGAGGC GGTCAAGGTC GGCAGCGTGG AGTGGGACGA CGAGTTGACC ATCACTGAGC GTGCGAAGGC CGTCGGCTCG GCTGGTCTGG AGGAGCTGCC GCCAGGTGCG ACCGTATCGG TGCGCGCGGC GGCCCAGCAG ATGATCTCCT CCAGCGACAA CATGGCGACG GACCTGCTCA TCGAGCGCCT CGGGCCTGGT GCGGTGGAGC GGGCGCTGGT GGCCGCCGGG CACCACGACC CGGCCAGCAT GACGCCGTTC CCCACGATGC ACGAGATGTT CTCGGTCGGC TGGGGTGAGC CGGATCTGCG CGAACAGTGG AAACAGGCCG ACCATCGTGG CCGCGTGGCG CTGCTGAAGC AGACCGACTC ACGGCCGTAC GAACCCGACC CGACCCGTAC GCATACCCCG GCCTCCGACT ACGGCGCCGA GTGGTACGGC AGCGCGTCCG ACATCTGCCG CGTCCACGCC GCCCTGCAGG CCGCGGCCGT CGGCGAGGCC GCACCGGTCA AGGACATCCT GTCGGCCATC CCCGGGGTCG AGTTGGACCG TGCCAAGTGG CCCTACATCG GCGCCAAGGG CGGCAACCTG CCCGGCGACC TGACGTTCAG CTGGTACGCC GTCGACCACA CCGGCCAGCC GTGGGTGGTC AGCTTCCAGC TCAACTGGCC CCGCTACCGG AGCCGGACCG CGGCCAGCTG GCTGCTGTCG ATCGTGCACC AGACGTTCGC GATGGTGCCC GTCGCCGATT AA
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Protein sequence | MRRVAGLVTA AALVVSSVSG CGQTNTAPAD AAYGAHIGTS TPQGLRAKQT MDMVNSDWPI GDVNVRTMAV EDQVDHIIDA MGNLWWDRPI TVTGVHMGAG TATLHVKTPY GAEQDIELRT DDNGLVDRFD VSLRSPVIEK WSDIDAVLAA SGARYSYQVS RVAEGGKCQR VAGTNTEMSL PLASIFKLYV LLAVAEAVKV GSVEWDDELT ITERAKAVGS AGLEELPPGA TVSVRAAAQQ MISSSDNMAT DLLIERLGPG AVERALVAAG HHDPASMTPF PTMHEMFSVG WGEPDLREQW KQADHRGRVA LLKQTDSRPY EPDPTRTHTP ASDYGAEWYG SASDICRVHA ALQAAAVGEA APVKDILSAI PGVELDRAKW PYIGAKGGNL PGDLTFSWYA VDHTGQPWVV SFQLNWPRYR SRTAASWLLS IVHQTFAMVP VAD
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