Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_4747 |
Symbol | |
ID | 4113576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 5024313 |
End bp | 5026184 |
Gene Length | 1872 bp |
Protein Length | 623 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638033898 |
Product | diguanylate cyclase/phosphodiesterase with GAF sensor |
Protein accession | YP_641907 |
Protein GI | 108801710 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.311394 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCGGA CCCTCGATCA GGTCGTCACC GCGGCGGCCG CGGAGTTGAT GGCGGCCACC GCCACCAACG TGGTCGAAAG CTGCACCCGG GTCCTCGCCG ACGTCGTCGC CCACCTGGGG GTCGACTTCA GCTTCCTGCG GCACAACGAC CACACCATCA AGGCCACCAA GCTGGTCGCC GAATGGCCGA TCCGCGACTA CATCCCGGAC CCGGACCCGA TCGGCACCAT CTATTTCGCC GAGGCCGACC CCGTCTTCCG GCAGGCCGAG TACCTCAAGA CACCGCTCAT CGTGCGTCCC GAACCGGACA ACGACGACTA CCAGCGCCGG ATCGAGGAGG GCCGAGGCGT GCCGTCGGTG TCGATGGCAT GCGTGCCATT GCTCTCGGGT GAGATGACCT CTGGCATCCT CGGCTTCATC AAGATCGGTG ACCGTGAGTG GACCACCGAG GAGCAGAACG CGCTGCAGGC GATCGCCACG CTGTTCGCCC AGCTGCAGGC CCGCATCGCC GCCGAGGAGC AGCTCCAGTA CCTCGCCGAG CACGACGATC TGTCCGGACT GCTGAACCGC CGGGCGCTGA TGGCGCACCT CGGCCTACGG CTCGCCGAGG GTCAGCCCGG TCCGGTGTCG GTGCTGTTCC TCGATCTCGA CCGGCTCAAG ACCGTCAACG ACTATCTGGG CCACAGCGCC GGTGACCAGT TCATCAAGAT GTTCGCCGAG CGGTTGCGGG CGGGCACCGA GAAGCCCGCC GTGATCGCCC GCGTCGGCGG TGACGAGTTC GTGGTGGTCC CCGACGAACC GATGGACGTC GTGGCGGTCG AGAGCTTCGC CCGCCGGCTG CAGACGTGGT TGCAGCGGCG GGTCGTCATC GACGGCGAGA TGCTTGCGCG CACTGTGAGC ATCGGCGTCG CCGTCGGCAC TCCCGGTGAC GACACCACAT CGGATCTGCT GCGCCGCGCC GACCAGGCGG CCCTGTCGGC GAAGAGCACC GGCGGCAGCA AGACGGCGGT GTTCACCACG GAGATGGCGT CCCAGCACGC CATCCGCAAC GACATCGAAC TGCACCTCGA GGGTGTGATC GACGAGGCGA GCAGCGCGCT CGTCCTGCAC TACCTACCCG AGATCGACAT GCGCACCGGG AAGGTGCTCG GCACCGAGGC ACTGGTCCGC TGGCGGCATC CGACCAGGGG GCTGCTGCTG CCCGAGTCGT TCATCGGGGT GGCCGAATCC ATCAATCTCG CAGGCAAACT CGGCCGACTG GTGATGCGCT CGGCATGCGC GGACTTCGCC CGCTGGAGGT CGCGCCGCAC CGCAGGCGAC GCCATCCTGC GGATCAACGT CTCACCCGTG CAACTGGTTT CGGATGGATT CGCGGCGACC GTCGCCGGCA CCCTCGACGA GTTCGGGGTC GACGGTTCCG CGGTGTGCCT GGAGATCACC GAGAGCGTGG TGGTCCAGGA CATCGAGGCC ACCCGCCACA CACTGGCCGC ACTCAAAGAG GTCGGCGTGC GCATCGCGAT CGACGACTTC GGTACCGGCT ACAGCGTTCT CACGCACCTG AAGTCACTGC CCGTCGACAC CGTCAAGATC GACCGCAGCT TCGTCCGTGA CCTCGGCGCC AGCCCCGGCG ACCTGGCGAT CGTGCGGGCC ATCCTGGCGT TGGCCGATGC GTTCGAACTC GAGGTGGTGG CCGAAGGGGT GGAGACCGTC GCGGCCGCCA AGACGCTGCT CGAACTGGGT TGCCCACGCG CGCAGGGGTT CATGCTGTCG CGTCCGGTCG ACGCGGCGGC GATGGAGGCG TTGTTCCGTG AGGGGCGCAT CGCCGTCGAC GCGTGGCGTG ACGACGCCGC AACCGTGAAC GGACGGCAGT AG
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Protein sequence | MTRTLDQVVT AAAAELMAAT ATNVVESCTR VLADVVAHLG VDFSFLRHND HTIKATKLVA EWPIRDYIPD PDPIGTIYFA EADPVFRQAE YLKTPLIVRP EPDNDDYQRR IEEGRGVPSV SMACVPLLSG EMTSGILGFI KIGDREWTTE EQNALQAIAT LFAQLQARIA AEEQLQYLAE HDDLSGLLNR RALMAHLGLR LAEGQPGPVS VLFLDLDRLK TVNDYLGHSA GDQFIKMFAE RLRAGTEKPA VIARVGGDEF VVVPDEPMDV VAVESFARRL QTWLQRRVVI DGEMLARTVS IGVAVGTPGD DTTSDLLRRA DQAALSAKST GGSKTAVFTT EMASQHAIRN DIELHLEGVI DEASSALVLH YLPEIDMRTG KVLGTEALVR WRHPTRGLLL PESFIGVAES INLAGKLGRL VMRSACADFA RWRSRRTAGD AILRINVSPV QLVSDGFAAT VAGTLDEFGV DGSAVCLEIT ESVVVQDIEA TRHTLAALKE VGVRIAIDDF GTGYSVLTHL KSLPVDTVKI DRSFVRDLGA SPGDLAIVRA ILALADAFEL EVVAEGVETV AAAKTLLELG CPRAQGFMLS RPVDAAAMEA LFREGRIAVD AWRDDAATVN GRQ
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