Gene Mmcs_4742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_4742 
Symbol 
ID4113571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp5019246 
End bp5020646 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content71% 
IMG OID638033893 
ProductDNA repair protein RadA 
Protein accessionYP_641902 
Protein GI108801705 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1066] Predicted ATP-dependent serine protease 
TIGRFAM ID[TIGR00416] DNA repair protein RadA 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCAAGG CACGTTCTCA ATACCGCTGT TCGGAGTGCC GGCACATCAC CGCCAAATGG 
GTGGGCCGCT GCCCGGACTG TGGCACGTGG GGAACGGTCG AGGAAGTCGC GGTCCTGGCC
GCCGTGGCCG GCGCACCCGC CCGCCACGCG GTGGCGCCCG CCTCCCCCGC TGTTCCGATC
AGCAGCATCG ACCCGGGCCG TACCAGACAC GACGAGACCG GGATCAGCGA ACTCGACCGG
GTCCTCGGCG GTGGGCTGGT ACCCGGTTCG GTGACGCTGC TCGCGGGTGA TCCTGGCGTC
GGCAAGTCGA CCCTGCTCCT CGAGGTCGCG CACCGCTGGG CCGTGTCGGG TCGGCGTGCG
CTGTACCTGA CCGGTGAGGA GTCGGCCGGC CAGGTGCGCC TGCGGGCCGA GCGCACCGGC
TGTACCCACG ACGAGCTGTA TCTCGCCGCG GAATCCGATC TGCCCACCGC GCTGGGCCAC
ATCGACGCCG TGCAGCCGAG CCTCGTGGTC GTCGACTCCG TGCAGACCAT GTCCACCAGC
GAGAACGACG GCGTCACCGG CGGCGTGACC CAGGTGCGGG CCGTCACCAC CGCGCTCACC
CAGTACGCCA AGGGGGCGGC GGGGCCGGGC GGCCCCGGTG GCATCGCCAT GGTGCTGGTC
GGCCACGTCA CCAAGGACGG GGCGATCGCC GGGCCGCGTT CGCTGGAACA TCTGGTCGAC
GTGGTGCTGC ATTTCGAGGG TGACCGCAAC TCGACGCTGC GGATGGTGCG CGGGGTCAAG
AACCGGTTCG GCGCAGCCGA CGAGGTCGGC TGTTTCCAGT TGCACGACAA CGGCATCGAA
TGCGTGGCCG ATCCGTCCGG GCTCTTCCGC GACCAGCGCG ACACCCCGGT GGCCGGCACC
GCGGTGACGG TGGCCCTCGA CGGTAAACGT CCACTCATCG GCGAGGTGCA GGCGCTGGTC
GGGCCGCCCA CCGGACCGCA TCCCCGCCGT GCCGTCAGCG GGATCGACGC CGCCCGCGCC
GCGATGATCG CCGCCGTCCT CGACAAACAC GCCAGGCTGC AGGTGGGACC CTGCGACATC
TACCTGTCGA CGGTCGGCGG TATGCGGCTG ACCGACCCGT CGTCGGACCT CGCGGTCGCG
ATCGCAATGG CCTCCGCGCG CAAGGAACGG GCGATGCCGG CGAACTCGGT GGTGATCGGC
GAGCTCGGCC TCGCGGGTGA TCTGCGGCGG GTGACAGGTA TGGACCGCCG CCTCGCCGAG
GCCGCCCGAC TGGGGTTCAC CACGGCCGTC GTACCGCCCG GCACGACGGG CGTACCGCCC
GGCCTTCGAG TGCTGCCCGC CGAGAACATC TCGGCGGCGT TGCGGGTCCT GGACCGCATC
GCAGACAATG GCGGCCGATG A
 
Protein sequence
MAKARSQYRC SECRHITAKW VGRCPDCGTW GTVEEVAVLA AVAGAPARHA VAPASPAVPI 
SSIDPGRTRH DETGISELDR VLGGGLVPGS VTLLAGDPGV GKSTLLLEVA HRWAVSGRRA
LYLTGEESAG QVRLRAERTG CTHDELYLAA ESDLPTALGH IDAVQPSLVV VDSVQTMSTS
ENDGVTGGVT QVRAVTTALT QYAKGAAGPG GPGGIAMVLV GHVTKDGAIA GPRSLEHLVD
VVLHFEGDRN STLRMVRGVK NRFGAADEVG CFQLHDNGIE CVADPSGLFR DQRDTPVAGT
AVTVALDGKR PLIGEVQALV GPPTGPHPRR AVSGIDAARA AMIAAVLDKH ARLQVGPCDI
YLSTVGGMRL TDPSSDLAVA IAMASARKER AMPANSVVIG ELGLAGDLRR VTGMDRRLAE
AARLGFTTAV VPPGTTGVPP GLRVLPAENI SAALRVLDRI ADNGGR